Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g1028 ATGGCATCAAGCTCAATGTCATCCTCAGGGTCATGGTCTGCTAAGGACAATAAAGCCTTTGAGAGGGCTCTAGCAGTTTATGACAAGGACACTCCCGACCGTTGGTACAACGTTGCCAAGGCTGTCGGTGGGAAAACACCTGCGGAAGTGAAGAGACACTACGATCTCCTTGTGGAGGACGTGAAGCAAATCGAGTCAGGACGAGTGCCCTTTCCTAATTACAGGAACAATAGAGCCTCTGACGAGGAAAAAAGGTATATGACCACCCACAACAATGGTTTCCATTTATCTTTCAACTGGCAAGCTGAAGTTGCACTGGCTGAGGAACTTGAAGCTCCAGTGAACAAACTGGTATCAACAACAATGAAGATTTTCAACATCCTGCAGCCTCACATGGAAGTGCATGGTGTTATATTTGATATATGA 426 0.4601 MASSSMSSSGSWSAKDNKAFERALAVYDKDTPDRWYNVAKAVGGKTPAEVKRHYDLLVEDVKQIESGRVPFPNYRNNRASDEEKRYMTTHNNGFHLSFNWQAEVALAEELEAPVNKLVSTTMKIFNILQPHMEVHGVIFDI 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g1028 141 ProSiteProfiles Myb-like domain profile. 4 58 IPR001005 -
Lele16g1028 141 FunFam Transcription factor SRM1 4 71 - -
Lele16g1028 141 ProSiteProfiles SANT domain profile. 7 62 IPR017884 -
Lele16g1028 141 SUPERFAMILY Homeodomain-like 11 65 IPR009057 -
Lele16g1028 141 Gene3D - 2 71 - -
Lele16g1028 141 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 1 84 IPR044636 GO:0003700
Lele16g1028 141 SMART sant 8 60 IPR001005 -
Lele16g1028 141 CDD SANT 18 54 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g1028 Lele-ChrLele16 5800750 5801243 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lele16g1028 None None None