Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g1023 ATGGGACTGTGTCATGGAAAACCTAACGAAATCCCACAAACGCAAGGGGGAGAAAATCCAATATTCTGCGACGACAAAGACGAGCTTCCAAATTCTCAAGGAAGGAAATCCTCAAACTTTCCCTTTTATAGCCCAAGTCCCTTACCGAGCCTCTTCAAGAACTCACCTGCAATCTCGAGCGTGAGCTCAACTCCTTTACGCATCTTCAAGCGCCCATTTCCTCCTCCTTCGCCCGCCAAGCACATTCGGTCACTGCTTGCTCGAAGGCATGGTTCCGTGAAGCCAAACGAGGCCTCCATCCCCGAAGGAAGCGAGTGCCACGTTGGACTCGACAAGAGTTTCGGGTTTTCGAAGCAGTTCCTAGCTTATTGCGAGCTTGAAGAAGAAGTGGGACGTGGCCATTTTGGATATACTTGCTCCGCCAAGGGAAAGAAAGGCAGCTTGAAGGGGCAGGATGTGGCGGTCAAAGTCATCCCAAAATCCAAGATGACAACAGCTATTGCTGTAGAGGACGTAAGGAGAGAAGTGAAGATGATGCGGGCTCTTACGGGACATAAGAACCTGGTGCAATTCTACGAGGCCTATGAAGATGATGACAATGTTTATATAGTTATGGAGTTATGCAAAGGAGGTGAACTCCTAGATAGAATACTTTCCAGCTCAAATTTAATTATGATCTATAGGGGTGGAAAGTACTCAGAAGAGGACGCCAAGGTTGTTATGATTCAGATATTAAGTGTGGTGGCTTACTGTCATCTTCAGGGTGTGGTTCATCGAGATCTCAAGCCAGAGAATTTTCTTTTTACATCTAAGGATGAAAACTCCACTCTAAAGGCTATTGATTTTGGTCTCTCTGACTATATAAAGCCAGATGAAAGGTTGGATGATATTGTGGGAAGTGCATACTATGTGGCTCCTGAAGTTTTGCATAGATCTTATGGGACTGAAGCAGACATGTGGAGCATCGGTGTAATTGCTTATATTCTATTATGTGGAAGCCGTCCTTTCTGGGCCCGGACAGAATCTGGCATCTTTCGAACTGTCCTGAAGGCAGATCCAAGTTTTGATGAAACTCCTTGGCCTTCTTTATCAGCTGATGCAATAGATTTTGTAAAGAGACTATTGAACAAGGATTATCGTAAGAGATTAACTGCAGCTCAGGCTCTTTGTCATCCATGGCTGGCAAATCATCAAGATGGTATGAAGATACCTTTGGATATGATAATCCCCAAGTTTGTTAAGGCTTACACAAGCTCATCTTCTTTACGCAAATCAGCACTAGGGGCTCTTGCCAAGACATTAACAGTAGCTCAGCTAGCTTATTTCAGAGAACAATTTACCCAGTTAGGGCCGAATAAAAATGGATTTATCGCAATGCAGAACTTTAAGACGGCTTTTTTGAGGAGCTCTACTGATGCCTCAAAGGATTCACGGGTCCTGGATTATGTGAACGTGATTAGTTCTATCCAATACAGGAAATTAGACTTTGAGGAATTTTGTGCTGCTGCTATAAGCGTGCACCAGCTTGAGGGTATGGAGACCTGGGAGCAACATGCTAGGCGAGCCTATGAGCTATTTGAAAAGCGTGGAAATAGACCAATTATGATTGAAGAACTAGCCTCGGAACTTGGGCTCAGCCCATCGGTGCCTGTTCATGTGGTTCTGCAAGATTGGATACACGCAGATGGAAAACTTAGTTTCTTGGGGTTTGTCAGACTTCTGCATGGGGTTTCTTCCCGCACATTTCAGAAGGCTTGA 1758 0.4477 MGLCHGKPNEIPQTQGGENPIFCDDKDELPNSQGRKSSNFPFYSPSPLPSLFKNSPAISSVSSTPLRIFKRPFPPPSPAKHIRSLLARRHGSVKPNEASIPEGSECHVGLDKSFGFSKQFLAYCELEEEVGRGHFGYTCSAKGKKGSLKGQDVAVKVIPKSKMTTAIAVEDVRREVKMMRALTGHKNLVQFYEAYEDDDNVYIVMELCKGGELLDRILSSSNLIMIYRGGKYSEEDAKVVMIQILSVVAYCHLQGVVHRDLKPENFLFTSKDENSTLKAIDFGLSDYIKPDERLDDIVGSAYYVAPEVLHRSYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRTVLKADPSFDETPWPSLSADAIDFVKRLLNKDYRKRLTAAQALCHPWLANHQDGMKIPLDMIIPKFVKAYTSSSSLRKSALGALAKTLTVAQLAYFREQFTQLGPNKNGFIAMQNFKTAFLRSSTDASKDSRVLDYVNVISSIQYRKLDFEEFCAAAISVHQLEGMETWEQHARRAYELFEKRGNRPIMIEELASELGLSPSVPVHVVLQDWIHADGKLSFLGFVRLLHGVSSRTFQKA 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g1023 585 ProSitePatterns Protein kinases ATP-binding region signature. 130 156 IPR017441 GO:0005524
Lele16g1023 585 Gene3D - 419 576 - -
Lele16g1023 585 SUPERFAMILY Protein kinase-like (PK-like) 125 425 IPR011009 -
Lele16g1023 585 FunFam Calcium-dependent protein kinase SK5 304 399 - -
Lele16g1023 585 ProSiteProfiles Protein kinase domain profile. 124 394 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele16g1023 585 Gene3D Transferase(Phosphotransferase) domain 1 224 418 - -
Lele16g1023 585 CDD STKc_CAMK 125 393 - -
Lele16g1023 585 ProSitePatterns Serine/Threonine protein kinases active-site signature. 256 268 IPR008271 GO:0004672|GO:0006468
Lele16g1023 585 Gene3D Phosphorylase Kinase; domain 1 127 217 - -
Lele16g1023 585 SMART serkin_6 124 394 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele16g1023 585 FunFam CDPK-related kinase 1 432 504 - -
Lele16g1023 585 PANTHER SERINE/THREONINE-PROTEIN KINASE 111 551 - -
Lele16g1023 585 FunFam CDPK-related kinase 3 116 296 - -
Lele16g1023 585 FunFam CDPK-related kinase 1 117 212 - -
Lele16g1023 585 MobiDBLite consensus disorder prediction 1 42 - -
Lele16g1023 585 Pfam Protein kinase domain 126 394 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele16g1023 585 SUPERFAMILY EF-hand 424 576 IPR011992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g1023 Lele-ChrLele16 5779371 5783250 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g1023 1 583 EF-hand Containing Proteins AT3G50530 65.102 0.0 825
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Lele16g1023 Pkinase 8.1e-69 CL0016