Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g1017 ATGGCAAGGCTCTTGGCTCCATTGTTTAATCGCGTTTTGGTGGAGAAGATCGTTCCTCCATCGAAAACTCACGCTGGGATTTTGCTTCCAGAGAAATCCAATAAGCTGAATTCTGGAAAAGTTATTGCCGTGGGCCCTGGCATTCATGATAAAGAGGGAAAGCTAATTCCTGTACCTGTAAAGGAGGGTGACACTGTCCTTTTACCGGAATATGGAGGATTGGAGGTGAAGCTCGGTGACGAAGAGTATCATTTATATCAAGATGAGGACCTACTGGGCACGTTGCATGATTGA 294 0.4558 MARLLAPLFNRVLVEKIVPPSKTHAGILLPEKSNKLNSGKVIAVGPGIHDKEGKLIPVPVKEGDTVLLPEYGGLEVKLGDEEYHLYQDEDLLGTLHD 97
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lele16g1017 97 FunFam 10 kDa chaperonin, mitochondrial 1 97 - -
Lele16g1017 97 Gene3D GroES chaperonin 2 97 IPR037124 GO:0006457
Lele16g1017 97 PANTHER 10 KDA HEAT SHOCK PROTEIN 3 94 IPR020818 GO:0005524|GO:0006457|GO:0140662
Lele16g1017 97 Pfam Chaperonin 10 Kd subunit 6 94 IPR020818 GO:0005524|GO:0006457|GO:0140662
Lele16g1017 97 SUPERFAMILY GroES-like 4 96 IPR011032 -
Lele16g1017 97 PRINTS 10kDa chaperonin signature 82 95 IPR020818 GO:0005524|GO:0006457|GO:0140662
Lele16g1017 97 PRINTS 10kDa chaperonin signature 61 73 IPR020818 GO:0005524|GO:0006457|GO:0140662
Lele16g1017 97 PRINTS 10kDa chaperonin signature 5 20 IPR020818 GO:0005524|GO:0006457|GO:0140662
Lele16g1017 97 PRINTS 10kDa chaperonin signature 26 47 IPR020818 GO:0005524|GO:0006457|GO:0140662
Lele16g1017 97 CDD cpn10 7 95 IPR020818 GO:0005524|GO:0006457|GO:0140662
Lele16g1017 97 SMART Cpn10_2 4 95 IPR020818 GO:0005524|GO:0006457|GO:0140662
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lele16g1017 Lele-ChrLele16 5745217 5746548 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g1017 5 96 Calmodulin-binding Proteins AT5G20720 40.426 6.74e-13 60.5