Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g1016 ATGTCAGACACATGGAATCTTGGAAGTTTGGTGGGAGTTTTCGATAGACAGAAACTCGGTTATGTTGTGGATATTCTTGTAATTGTACGTCAAATTGTATTTTGTAATTCGTATAAAACTGATTTCGATATAACACACATTAACATTACACTAAAATTTATACGGTCTCCTAGTCCATGGCAAGGCAGCTATATGCGGATTCATGGGCAGCTTCTCGACAACAAAATGAACAAGGAAAAATCAGTAATGCAAGTAACAAGGGGTAATATAGGAAGATTTTTTAGCACATGTTCAGACGCTCAGTACTTCTGCTTTGCATTTCTGAACTGTGTAGATCTACTCGTGAAGATCACTCCAGGAATTTCAGATGGTGATTGGGGAAGAAATCTAAACATGAAAGATTCTATTCACATCAAAACGACCCAAGGATCACTAAAAGCGAGACAAAAGCATTGGCCATTGAAGACTTGTGTGCCTGTTCTCAATTACCCAAAACATCAGATCTTAGTATCTTATACCATTATATCTCAGCCGCTTGCCATGGCTGCAACGTTAATATTTGTGGTTCTTGCACAAATATTCACATTAGTTACTTCACTGTCGGAAGCTGATAAGATTACTAGTTTGCCAGGGCAGCCACCGGTCAAATTTAAGCAATACGCCGGTTATATTACAGTTGATGAGAACCAGCACAGAGCTCTATTTTACTATTTTGCTGAAGCAGAATCAGAACCTGCTTCTAAGCCACTGGTTCTCTGGTTAAATGGAGGGCCTGGTTGTTCGTCTGTGGGAGCTGGAGCTTTTGTTGAACATGGACCTTTCAAACCAAGTGAAAACTTTCTCGTGAAAAATGAATATAGTTGGAACAGAGAGGCAAATATGCTATACGTGGAATCACCAGCCGGTGTTGGTTTCTCCTACTCTGCTAATGAATCATTCTATGATTTTGTGAACGATGAAATCACAGCAAGAGACAATCTTGTTTTCCTACAACGTTGGTTCACTAGATTCCCAGAGTACAAAAGCAATGATTTCTTCATCACGGGGGAGAGCTATGCAGGTCACTATGTACCCCAACTTGCACAGCTCATTGTTCAAACCAAAACAAAGTTCAATCTCAAGGGGATAGCTATAGGGAATCCTGTTTTGGAATTTAATACTGATCTAAATTCTAGAGCTGAGTTCTTTTGGTCACACGGACTAATATCAGATTCAACTTATGAGATCTTCCGCACAGTTTGCAATTTTTCCCAAATTTGGAGACAATATCACAGGGAAACTCCAAGTGTGAGTTGTGCAGAAGCGAATAAACTGGCGACAAGGGAGATTGGTAACTTTGTTAATCCATACGATGTAACTCTCGATGTTTGTCTGTCATCCTTAGATAAGCAGGCTCAAATGCTGGATCAACTGCAAGAGTCAGCCAAGATAGATGTTTGTTTGGAAGATGAAACATCTGCATATTTGAACAGGAAAGAAGTACAGGAAGCTCTCCATGCAAAGCTAGTGGGAATTATCAACTGGTCTGTTTGTAGCGAGGTACTAAGATATGACTATCAGAATCTAGAAATACCAACAATTCATATTCTAGGAGAACTTGTTAAGTCCGGCATCCAGGTTTTCGCGTACAGTGGAGATCAAGATTCAGTGGTCCCGCTAACCGGAACGCGTTATCTGGTGAATAAATTAGCCAAGGAGTTAGGACTCAATTCAACCGTACCTTACAGAGCCTGGTTCAAGGGAAGACAGGTTGCCGGATGGACACAAGTTTATGGTAACATATTATCATTTGCCACCATAAGAGGGGCTGCTCATGAAGCTCCATTTTCGCAGCCAGAGAGATCACTCGTACTACTCCAATCGTTGCTCCAGGGAATGCCCCTTCCAGATGCGGCTCCTTCAACCTAA 1908 0.4109 MSDTWNLGSLVGVFDRQKLGYVVDILVIVRQIVFCNSYKTDFDITHINITLKFIRSPSPWQGSYMRIHGQLLDNKMNKEKSVMQVTRGNIGRFFSTCSDAQYFCFAFLNCVDLLVKITPGISDGDWGRNLNMKDSIHIKTTQGSLKARQKHWPLKTCVPVLNYPKHQILVSYTIISQPLAMAATLIFVVLAQIFTLVTSLSEADKITSLPGQPPVKFKQYAGYITVDENQHRALFYYFAEAESEPASKPLVLWLNGGPGCSSVGAGAFVEHGPFKPSENFLVKNEYSWNREANMLYVESPAGVGFSYSANESFYDFVNDEITARDNLVFLQRWFTRFPEYKSNDFFITGESYAGHYVPQLAQLIVQTKTKFNLKGIAIGNPVLEFNTDLNSRAEFFWSHGLISDSTYEIFRTVCNFSQIWRQYHRETPSVSCAEANKLATREIGNFVNPYDVTLDVCLSSLDKQAQMLDQLQESAKIDVCLEDETSAYLNRKEVQEALHAKLVGIINWSVCSEVLRYDYQNLEIPTIHILGELVKSGIQVFAYSGDQDSVVPLTGTRYLVNKLAKELGLNSTVPYRAWFKGRQVAGWTQVYGNILSFATIRGAAHEAPFSQPERSLVLLQSLLQGMPLPDAAPST 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g1016 635 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 204 612 IPR001563 GO:0004185|GO:0006508
Lele16g1016 635 SUPERFAMILY alpha/beta-Hydrolases 206 629 IPR029058 -
Lele16g1016 635 FunFam Carboxypeptidase 526 625 - -
Lele16g1016 635 Pfam Serine carboxypeptidase 210 624 IPR001563 GO:0004185|GO:0006508
Lele16g1016 635 FunFam Carboxypeptidase 199 629 - -
Lele16g1016 635 Gene3D alpha/beta hydrolase 200 459 IPR029058 -
Lele16g1016 635 PRINTS Carboxypeptidase C serine protease (S10) family signature 297 307 IPR001563 GO:0004185|GO:0006508
Lele16g1016 635 PRINTS Carboxypeptidase C serine protease (S10) family signature 333 358 IPR001563 GO:0004185|GO:0006508
Lele16g1016 635 PRINTS Carboxypeptidase C serine protease (S10) family signature 595 608 IPR001563 GO:0004185|GO:0006508
Lele16g1016 635 PRINTS Carboxypeptidase C serine protease (S10) family signature 284 296 IPR001563 GO:0004185|GO:0006508
Lele16g1016 635 ProSitePatterns Serine carboxypeptidases, serine active site. 347 354 IPR018202 GO:0004185
Lele16g1016 635 Gene3D - 527 625 - -
Lele16g1016 635 Gene3D - 480 515 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g1016 Lele-ChrLele16 5740529 5744710 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g1016 488 628 Calmodulin-binding Proteins AT2G22960 29.078 2.23e-14 70.1