Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g1013 ATGGGAAGTAGAATCGTAAACATCAACATTCAGGAAGCTAACAACGTTGGGAACGAAATGCCGGGCTACGCTCCACAATTGCCTTCTTCTAGTTCCATGGGCATAGAGGGATCTGCTGTTCACCATTCTCAAATTTCTGAATTTGGAGCTCTTGAGCAATCACTTGGATTTCGTCTAGAAGATGCTATAAATCTTAGCAGAAGTACGTTGGTCACATTTGATCACTGTCTCAATCTCTTTTTCTTGAAAGACACTTTTTCTTCTTCTATGTATTATGATCCAATATTCAGTCAAATGAAGCCAAATAGCCAAGTTCTTGGTGGCGATGTTCAATTCGGTGCGTTAAGTAAGACATTGCCATCACAAAAAGACACACAACCTAATCTGGCTTCTACATCTGCTGGCCCTCATGAGAACTGGGGGAAGTCAAACATTGCAGATGCAAGCCCAAGAACTGGTACTTCAACAGATGACACAGATTCTAAAAATGAAGGGGTGATTCTTTTGCTTTCATTATATCACATCTGGACTTTAATTCATGCACCAACTCAATGCCTCTTGCCTGAAAGGGGCCACTCAGCTATTGCAGTATCTGATTCCAACGATAGATCAAAAGATAAATCAGATCAAAAGGGCATTTTCATTTCAAGTGCAGGAGACCAATCCCATTCAATGAGTGCAAATGGTGCCATGGCATTTGATGTAGAGTATGCACGATGGTTAGAAGAGCATAATAAACAAATCAGTGAGCTAAAGGCTGCAGTCAATTCCCATGCTGGAGATATTGAGCTGCGTACAGTAGTTGACAACATGATGACTCACTTTGATGAGATCTTCAGACTGAAAGGTGCTGCAGCAAAAGCTGATGTTTTCCACATACTGTCTGGATTGTGGAAGACTCCGGCAGAGAGGTGTTTCATGTGGATCGGAGGCTTCCGCTCTTCTGACCTTCTCAAGCTTCTTGTAAGTCAATTGGAGCCCTTAACTGAGCAACAAATTATGGGTATCTACAACTTGCAGCAGTCTTCCCAGCAGGCTGAAGATGCTCTGTCCCAAGGAATGGATGCGTTGCAGCAATCACTGGCCGAGACACTTGCTGATAATTCACCCAACCCCTCAGGCTCATCCCCAAACGTGGCTACTTATATGGGCCAGATGGCTAAGGCCATGGGGAAGCTTGGCACTCTTGAGGGGTTCCTTCGCCAGGCTGATAATCTGCGACAGCAGACATTACAACAAATGGTGCGGATATTAACCACCTGGCAATCCGCTCGAGCTCTACTTGCAATAGGTGATTATTTCTCTCGGCTACGAGCCTTAAGCTCACTGTGGCTTGCCCGACCCCGGGAATGA 1353 0.4479 MGSRIVNINIQEANNVGNEMPGYAPQLPSSSSMGIEGSAVHHSQISEFGALEQSLGFRLEDAINLSRSTLVTFDHCLNLFFLKDTFSSSMYYDPIFSQMKPNSQVLGGDVQFGALSKTLPSQKDTQPNLASTSAGPHENWGKSNIADASPRTGTSTDDTDSKNEGVILLLSLYHIWTLIHAPTQCLLPERGHSAIAVSDSNDRSKDKSDQKGIFISSAGDQSHSMSANGAMAFDVEYARWLEEHNKQISELKAAVNSHAGDIELRTVVDNMMTHFDEIFRLKGAAAKADVFHILSGLWKTPAERCFMWIGGFRSSDLLKLLVSQLEPLTEQQIMGIYNLQQSSQQAEDALSQGMDALQQSLAETLADNSPNPSGSSPNVATYMGQMAKAMGKLGTLEGFLRQADNLRQQTLQQMVRILTTWQSARALLAIGDYFSRLRALSSLWLARPRE 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g1013 450 MobiDBLite consensus disorder prediction 119 160 - -
Lele16g1013 450 ProSiteProfiles DOG1 domain profile. 230 447 IPR025422 GO:0006351|GO:0043565
Lele16g1013 450 PANTHER TRANSCRIPTION FACTOR TGA9 210 450 - -
Lele16g1013 450 Pfam Seed dormancy control 247 323 IPR025422 GO:0006351|GO:0043565
Lele16g1013 450 Coils Coil 241 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g1013 Lele-ChrLele16 5722556 5725859 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g1013 145 450 bZIP Transcription Factor Family AT3G12250 56.941 1.34e-129 376