Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g1006 ATGTTGGCTTTATCTCCTTCTCTTTTCGCACCCATTGAGTGGGCCTTGGAGGAACCCGCAAGTCATAATGATCCTAACTTGTTTTACAAAGACGGAGATCTTCATCAGTTTAGTTGCTCGCCACCAATTCATCAGTTTAGTTGCTCGCCACCAAATCATCAGGTTGAGTTTGAGGTTGAGGTGGCTCCGAGATCTGCGCCAATATCCCTTGCCGAAAGTGGAGACCCTACCATGGTCAAAAAGCTTAACCACAATGCTAGTGAACGCGATCGTCTCAAGAAGATCAACAGCTTGTATTCCTCTATTCGTTCTATGCTCCCTTTGTCTGATCAATCGAAGCAGTTAAGCATTCCGGCAACGATTTCACGAGTCCTAAAGTACATTCCCGAGTTACTGAAGCAAGTGGAAGTGCTTGTCAAGAAAAAGGAGGAGCTTTTGTTGAGAATCGCTCGCCAAGGAGATGCGGCAACCAAAGAATCTCGAAGGAAAATGGCTCATCACTACGCTGCCACTGCTTTCGTAGTTTCAACAAGCAGGCTCAATGATAACGAATTCGTAATTCAGATTTCCTCTGACAAGCTCCACAAAACTCCTTTTTCAGAGATATTGCTGTGTTTAGAAAAGGAAGGGCTTTTACTGCTAAATGCTTCCTCCTTTGAGACCTTTGGACAACGTGTCTTCTATAACTTGCATCTGCAGACGGATGAAACGTGTAGAATAGAGCCAGAAATTCTTAGCGAGAAGATTTTGTCAGTATATGAGAGGAATTGA 771 0.4397 MLALSPSLFAPIEWALEEPASHNDPNLFYKDGDLHQFSCSPPIHQFSCSPPNHQVEFEVEVAPRSAPISLAESGDPTMVKKLNHNASERDRLKKINSLYSSIRSMLPLSDQSKQLSIPATISRVLKYIPELLKQVEVLVKKKEELLLRIARQGDAATKESRRKMAHHYAATAFVVSTSRLNDNEFVIQISSDKLHKTPFSEILLCLEKEGLLLLNASSFETFGQRVFYNLHLQTDETCRIEPEILSEKILSVYERN 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g1006 256 FunFam Transcription factor ORG2 75 166 - -
Lele16g1006 256 Gene3D - 74 166 IPR036638 GO:0046983
Lele16g1006 256 CDD bHLH_AtORG2_like 80 152 - -
Lele16g1006 256 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 79 131 IPR011598 GO:0046983
Lele16g1006 256 SMART finulus 85 137 IPR011598 GO:0046983
Lele16g1006 256 Pfam Helix-loop-helix DNA-binding domain 80 131 IPR011598 GO:0046983
Lele16g1006 256 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 71 249 IPR015660 -
Lele16g1006 256 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 80 149 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g1006 Lele-ChrLele16 5693786 5694920 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g1006 1 255 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G56970 42.205 2.02e-57 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele16g1006 HLH 1e-08 No_clan