Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g1005 ATGGCTAAAGTTTTAAAATCCATCGTCCTCTTCATACTTACAGTGCTTCTATTGGCATCAAGCTCTGTTGATGGCAGAGTGCACGTGAGGATCACAAACATGTTAGATAATAATTTGGACTTGACTGTCCATTGCAAATCCAAAGATGACGACCTTGGAGAGCATCTTCTTCATCATCTAGATCATTATGAGTTCTCTTTCAACACCATTATTGGCGCCCCGTTATTTGGAGATACTCTATTCTTTTGTAGCTTTAAATGGAAAGGAGCTTTTAAGCGGTTTGATATATACAACGACGAAAGGGATAATTGTTTTACGGGGACATGCAATTGGAAAATTAAGCAAAATGAAGTATGTATGAGTGATGGTGACCATGAGGTTAAGGTTTGTTATCCATATAATATGGATGTATTATTCTAG 420 0.3714 MAKVLKSIVLFILTVLLLASSSVDGRVHVRITNMLDNNLDLTVHCKSKDDDLGEHLLHHLDHYEFSFNTIIGAPLFGDTLFFCSFKWKGAFKRFDIYNDERDNCFTGTCNWKIKQNEVCMSDGDHEVKVCYPYNMDVLF 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g1005 139 Pfam Plant self-incompatibility protein S1 28 132 IPR010264 -
Lele16g1005 139 PANTHER - 26 122 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g1005 Lele-ChrLele16 5690268 5690687 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g1005 26 138 Carbohydrate Esterase AT3G16970 37.288 2.55e-17 71.6