Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g1004 ATGTTGGCTTTATCGTCTTCTCTGTTGGCACCCATTGAGTGGGCCTTGGAGGAACCCACGAGTCATAATGATCCGAACTTGTTTTACAAAGACGGAGCTACTCTTAATCAGTTTAGTTCCTCGCCCCCAAATTATCAGGTTGAGTTTGAGGTTGAGGAAGTTCAGAGATCTGCGCCAATATGCCTTGCCGTCAGCGGAGACCCTACCATGGTCAAAAAGCTTAACCACAATGCCAGTGAACGCCATCGTCGCAAGAAGATCAACAGCTTGTATTCCTCACTTCGTTCTATGCTTCCTTTGTCTGATCAAACGAAGCAGTTAAGCATTCCGGCAACGATTTCACGGGTCCTAAAGTACTTACCCGAGTTACAGAAGAGTGTGGGAGTGCTTGTCAAGAAAAAGGAGGAGCTTTTGTTGAGAATCTCTCGCCAAGGAGATGCGTCAAGCAAAGAATCTCGGAGGAAAATGGCTCATCACTACGCAGCCACTGCTTGCGTAGTTTCAACAAGCAGGCTCAATGGTAACGAATCCGTAATTCAGATTTCCTCTGACAAGCTCCACAAAACTCCTTTTTCAGAGATATTGCTGTGTTTAGAAAAGGAAGGGCTTTTACTGCTAAATGCTTCCACCTTCGAGACCTTTGGACAACGGGTCTTCTATAACTTGCATTTGCAGATGGATGAAACGTGTAGAATAGAGCCAGAAGTTCTAAGCGAGAAGATTTTGTCAGTATATGAGAGGAAGGAAGGGAATTTTCAATGTTTCTAA 768 0.4466 MLALSSSLLAPIEWALEEPTSHNDPNLFYKDGATLNQFSSSPPNYQVEFEVEEVQRSAPICLAVSGDPTMVKKLNHNASERHRRKKINSLYSSLRSMLPLSDQTKQLSIPATISRVLKYLPELQKSVGVLVKKKEELLLRISRQGDASSKESRRKMAHHYAATACVVSTSRLNGNESVIQISSDKLHKTPFSEILLCLEKEGLLLLNASTFETFGQRVFYNLHLQMDETCRIEPEVLSEKILSVYERKEGNFQCF 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g1004 255 Pfam Helix-loop-helix DNA-binding domain 72 124 IPR011598 GO:0046983
Lele16g1004 255 SMART finulus 77 129 IPR011598 GO:0046983
Lele16g1004 255 Gene3D - 67 159 IPR036638 GO:0046983
Lele16g1004 255 FunFam Transcription factor ORG2 67 152 - -
Lele16g1004 255 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 59 241 IPR015660 -
Lele16g1004 255 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 72 141 IPR036638 GO:0046983
Lele16g1004 255 CDD bHLH_AtORG2_like 72 144 - -
Lele16g1004 255 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 71 123 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g1004 Lele-ChrLele16 5687339 5688481 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g1004 1 252 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G56970 41.313 8.25e-57 180
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele16g1004 HLH 3e-10 No_clan