Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g0998 ATGATTTTGGATGAAATCTGGTCGGATCTTGCTTTTCCGGGATGTGGATTTTGGTGGGTCTTCTTCCCTTCCATAACTCTTCTTTCCCCTCACTCCTGCCCTGAGACTCCCCCTCCTCCGACCGAAAACCAAGCCAGGCTCATTCTCCTCCGCTCTGATCTATTCCTCTCCCACACAATTCTGGGTTTTGTTCTGCGTCCAGAATCCGTGCAAATGGGAATGGCCGCGGAGTCCCAATTTCATGTTTTGGCCGTAGATGACAGCCTCATAGACCGGAAGCTGATTGAGAGGCTGCTCAAGACCTCCTCCTATCAAGTTACTACGGTGGATTCCGTTAGCAAGGCTCTGGAGTTCCTGGGCTTGCGCGACAATGACCAGATCGACCCCAGCACGCCACCGGTTTCTCCTGGCAATCATCAGGAACTGGAGGTGAATCTTATTATTACGGACTACTGTATGCCTGGCATGACAGGCTATGATTTACTCAAGAAAATCAAGGAATCTTCGTCTTTGAGAAACATACCGGTGGTGATTATGTCGTCGGAGAATGTGCCCTCAAGAATTAGCAGATGCTTGGAGGAAGGAGCAGAGGAGTTTTTTCTCAAGCCAGTGAGGCTCTCAGATTTGAAAAAGCTTCGACCCCATTTGATGAAGACGAAGTTGAAAGAACAAACGCCTGAAACGCAACAAAATCCTGAAAACCCACGAGTCCAACAAGAAGAAAATCAAATTGATGTGCAACAACCTACATCACAGCCACAACTAGACCAACAACGACAACCGCAATCACCACAAGCAGCCAGTAATAATAACAAGAGAAAGGCCATAGAACAACCGGGGATTTCACCTGAGCCCGACAGAACAAGACCTAGATACAGTGACATAGCCACAGTGGTGTGA 900 0.4811 MILDEIWSDLAFPGCGFWWVFFPSITLLSPHSCPETPPPPTENQARLILLRSDLFLSHTILGFVLRPESVQMGMAAESQFHVLAVDDSLIDRKLIERLLKTSSYQVTTVDSVSKALEFLGLRDNDQIDPSTPPVSPGNHQELEVNLIITDYCMPGMTGYDLLKKIKESSSLRNIPVVIMSSENVPSRISRCLEEGAEEFFLKPVRLSDLKKLRPHLMKTKLKEQTPETQQNPENPRVQQEENQIDVQQPTSQPQLDQQRQPQSPQAASNNNKRKAIEQPGISPEPDRTRPRYSDIATVV 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g0998 299 MobiDBLite consensus disorder prediction 223 276 - -
Lele16g0998 299 Gene3D - 81 280 - -
Lele16g0998 299 SMART REC_2 80 213 IPR001789 GO:0000160
Lele16g0998 299 ProSiteProfiles Response regulatory domain profile. 81 217 IPR001789 GO:0000160
Lele16g0998 299 PANTHER TWO-COMPONENT RESPONSE REGULATOR 80 260 IPR045279 GO:0009736
Lele16g0998 299 CDD REC_typeA_ARR 82 212 - -
Lele16g0998 299 MobiDBLite consensus disorder prediction 220 299 - -
Lele16g0998 299 Pfam Response regulator receiver domain 82 211 IPR001789 GO:0000160
Lele16g0998 299 SUPERFAMILY CheY-like 79 224 IPR011006 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g0998 Lele-ChrLele16 5641042 5643120 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g0998 72 299 Response Regulator Gene Family AT3G57040 64.315 1.83e-93 275
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lele16g0998 Response_reg 3.6e-19 CL0304