Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g0970 ATGTGGAACTGCTGGTTTGGATGCAGCAAAAAGCTCTCGACTTGTGAGGCAAGGCCCAAAAATTCAAAGAGATGGAGTTGTGGTCTTGGGGGGGTCAGGCAGAAACAACATCCCACACTTACAGAACCAAACAGAACACTAAGTGAAGCAAGAGAAGAACAGAGAAAGCATGCATTGACAGTGGCTATTGCAACAGCAGCAGCTGCTGAGGCTGCAGTGGCTGCTGCTCATGCTGCTGCTGAGGTTGTCAGACTCACAGGCGCTTCTCGCTCTTTCTCATATTTCTCCGAGGGAAATCGAAACTCGGCCGCTACTAAAATTCAAAGTGCATACCGTGGACATCTGGCCAGGAAAGCATTCAGAGCACTGAAGGGAATTATCAGACTGCAAGCTATAGTTCGTGGTCGAGCTGTGAGACGTCAAATGGGTTTGCACTCCAATGGAAGAAAGCAGGTAGGAATCCAGAAAAGCAGCAGTGATGCTGCAGATAGAATCAACAAAAATGATAAGACCAAGCAGCTTCCAAAGCAGAAAAAGAAGTTGGAAGATACGGAGATGAAGCTGGAATGTCACAGACAAAGAACTTGGGATTGCAGCTCGCACACAAAAGAAGACATGGAAGCTATATGGTTGAGAAAGCAAGAGGCTATTATTAAAAGAGAACGCATAAGGCAGTACTCTTTCTCACACCGGGAGAGGAAATTTTGCCCCGTAGGGGTTGAATCATCAGTTCCCTATAAGGAATTTAGAGGAGAGAGCTGCCGTACTCTAGGACAATGGCTGGACAGAGAAAAATGTAATGGAGATGTGTTTTCTAAAGCAACAATTCCTTCAAAATTGATAGCTAGGGAATGGTATGATACAGCACAAGAACATTTGCAAGAAGACGAATTGACTTCAGCCACTTCTTCACAGCTTTCATTTCCAAGGAAGTCATTTTCTTGTATGAAGAAAAGTTCAGTTGTAGATGAAAGTTTCATGCCAAATTCTCCAGTGTTGCCAACATTGATGGGTGGGAGAGCAAAGGCAAGGTCGATTAGCACTCCGAGACAAAGAACAGGATTTATGGAAATAAACTCAGATCGGACAGATTCTCTGAGTGAAGGCAGAACTTGTAGGTCTTGTTGTCATGAAGCAAGTAGCAGTGCCAATGGAGAAAATGAAGTCTCTCAGCAGAGATGTCAGAGTGTCAACCGCCACTACTATCGTTAG 1212 0.4464 MWNCWFGCSKKLSTCEARPKNSKRWSCGLGGVRQKQHPTLTEPNRTLSEAREEQRKHALTVAIATAAAAEAAVAAAHAAAEVVRLTGASRSFSYFSEGNRNSAATKIQSAYRGHLARKAFRALKGIIRLQAIVRGRAVRRQMGLHSNGRKQVGIQKSSSDAADRINKNDKTKQLPKQKKKLEDTEMKLECHRQRTWDCSSHTKEDMEAIWLRKQEAIIKRERIRQYSFSHRERKFCPVGVESSVPYKEFRGESCRTLGQWLDREKCNGDVFSKATIPSKLIAREWYDTAQEHLQEDELTSATSSQLSFPRKSFSCMKKSSVVDESFMPNSPVLPTLMGGRAKARSISTPRQRTGFMEINSDRTDSLSEGRTCRSCCHEASSSANGENEVSQQRCQSVNRHYYR 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g0970 403 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 100 142 IPR027417 -
Lele16g0970 403 ProSiteProfiles IQ motif profile. 124 151 IPR000048 GO:0005515
Lele16g0970 403 Pfam IQ calmodulin-binding motif 102 121 IPR000048 GO:0005515
Lele16g0970 403 MobiDBLite consensus disorder prediction 21 53 - -
Lele16g0970 403 SMART iq_5 99 121 IPR000048 GO:0005515
Lele16g0970 403 ProSiteProfiles IQ motif profile. 100 128 IPR000048 GO:0005515
Lele16g0970 403 PANTHER IQ-DOMAIN 5-RELATED 36 373 - -
Lele16g0970 403 Coils Coil 174 194 - -
Lele16g0970 403 Gene3D - 99 147 - -
Lele16g0970 403 MobiDBLite consensus disorder prediction 146 182 - -
Lele16g0970 403 MobiDBLite consensus disorder prediction 162 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g0970 Lele-ChrLele16 5503008 5505119 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g0970 5 357 IQD Protein Family AT5G03960 42.246 1.72e-51 176
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g1476 13 24188671 24190608 Lele16g0970 16 5503008 5505119 hybridization
Lele14g1402 14 22569020 22571963 Lele16g0970 16 5503008 5505119 hybridization