Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g0955 ATGCTGGTGGAGGATCCGGCCACGGACGACGTCATATCGTGGAACGCCGACGGCACTGCGTTTGTGGGATTTCGTAAAGCGGCAGCGAACAGATGGGAATTTTGCAACAACAAATTTAGGAAGGGGGGGAAAGAAAAACTGAGTGAGATCAGACGAAGAAAGGCGTGGGCGAACAGGCAACAACAACCAGCAGCATCAACACAAGCAAATCATCAGGAATATTCTGAGGAAGAGCAGAGGTCTTATTCAACCTCTTCGTCTTCTGGATATTCTACTCTGGTGGATGAAAACAAGAGACTGAGGAGAGAGAACGGGACATTGAGCTCCGAGCTGGCGGCCATGAAGAGGAAGTGCAGGGACCTGCTGAAGCTGGTGGCTAAGCATGCCAAGAATAACGAGGAAGAAGACGAGAGGCCTATATTATTTGGGGTGAGGCTAGATGTGAAGACGAAGACAAGTGCCAGTATCTTAATGCCCCAGTCATGCAAATAA 492 0.4939 MLVEDPATDDVISWNADGTAFVGFRKAAANRWEFCNNKFRKGGKEKLSEIRRRKAWANRQQQPAASTQANHQEYSEEEQRSYSTSSSSGYSTLVDENKRLRRENGTLSSELAAMKRKCRDLLKLVAKHAKNNEEEDERPILFGVRLDVKTKTSASILMPQSCK 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g0955 163 SUPERFAMILY "Winged helix" DNA-binding domain 2 53 IPR036390 -
Lele16g0955 163 SMART hsfneu3 2 53 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele16g0955 163 MobiDBLite consensus disorder prediction 79 94 - -
Lele16g0955 163 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 23 133 IPR027725 -
Lele16g0955 163 Coils Coil 97 117 - -
Lele16g0955 163 MobiDBLite consensus disorder prediction 53 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g0955 Lele-ChrLele16 5398452 5399348 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g0955 2 128 HSF AT2G41690 40.000 2.62e-30 108