Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g0954 ATGGCTTCTTCTTCGTCTGATCCTCCCGCCAAGCCCGAGCTTGGCTCTGCCATGCCAGAGACTTCCGAAGCAACCATCGCCAACGATCAGGTGTTCTTATACAGGGATTTCAAGAAGGCGAAGAAAGAGAGAGGTTGTACGGCCAAAGATCGAATCAGCAAAATGCCTCCTTGTACCGCCGGTAAACGCAGCTCCATATATCGTGGTGTCACCAGGCATAGATGGACAGGTCGTTATGAAGCACATCTTTGGGATAAGAGCACGTGGAACCAAAATCAGAATAAGAAAGGGAAGCAAGGGGCGTATGACGATGAAGAGGCTGCAGCTAGAGCTTATGATCTTGCAGCTCTAAAATATTGGGGTCCTGGCACTCTCATTAATTTTCCACCAAAAGGATCATGTGTCTATTCACTTCTTACATTATTCTCTGATATCAAAAGATGCTTTGCATGGCCTGAATTTGAAATTGAAAACTGTCACTTTGCTCTGGGACTAGTGTCTGATTATACAAGAGATCTTGAAGAAATGCAGAATTTTTCAAGAGAAGAATACCTAGCATCTTTACGACGGAAGAGCAGTGGCTTTTCAAGAGGACTCTCAAAATACCGTGGACTCTCCAGTCGATGGGAACCATCATATGGTCGCATGGCTGGATCTGACTACTTCAATAGCATGCATTATGGTACATGTGATGACTCAGCTGCAGAAAGTGAATATTTAAGTGGTTTCGGTGTAGACAGAAAGATTGATCTAACAAGTTACATCAAATGGTGGGGATCTAATAGTAAGAGTCGACAAGCTGATACTGGAACAAAATCATCATCAGAAGAAAAAAAGCGCAGTTTTGGTGGAGATCATTGCAGTGAACTCAGAACATTGGAACAGCAAGAACAACCTACTGAACCATATCAGATGCCACGGTTAGGCACTTCCCATGATGAAAAGAAGCATAAAAAGACTTCAGTTTCTGCCTTAAGTATCTTATCTCGATCAGCTGCTTACAAGAGCTTGCTAGAGAAAGCATCAAATAGAGAAGAAAATGGCAGCACTGACCCTAATGAAAATGACAACAAAAATAGCATTTGTAAGTTGGACCGTGGCAAGGAGGTGGAGAAATCATCGGGAGATGGAAGAACTGAATCTGTAATGGGGATGAGTGGGGCTTTGTCTCTTCAAAAGAATGTTTACAACAGCCCAGTGGCTCCATTCCTGTCTGCACCACTTTTGACTGCTTACAATAGTATCGATCCCTTAGTAGATCCTCTTCTCTGGACTTCTCTTGTTCCCATGCTTCCTGCTGGCCTTTCCCGTAATGCTCAGGTTACAAAGACTGAGGCCAGTTCATCTTATGCCGTGTTTCAGCCGGAGGAGTGA 1374 0.4389 MASSSSDPPAKPELGSAMPETSEATIANDQVFLYRDFKKAKKERGCTAKDRISKMPPCTAGKRSSIYRGVTRHRWTGRYEAHLWDKSTWNQNQNKKGKQGAYDDEEAAARAYDLAALKYWGPGTLINFPPKGSCVYSLLTLFSDIKRCFAWPEFEIENCHFALGLVSDYTRDLEEMQNFSREEYLASLRRKSSGFSRGLSKYRGLSSRWEPSYGRMAGSDYFNSMHYGTCDDSAAESEYLSGFGVDRKIDLTSYIKWWGSNSKSRQADTGTKSSSEEKKRSFGGDHCSELRTLEQQEQPTEPYQMPRLGTSHDEKKHKKTSVSALSILSRSAAYKSLLEKASNREENGSTDPNENDNKNSICKLDRGKEVEKSSGDGRTESVMGMSGALSLQKNVYNSPVAPFLSAPLLTAYNSIDPLVDPLLWTSLVPMLPAGLSRNAQVTKTEASSSYAVFQPEE 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g0954 457 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 36 343 - -
Lele16g0954 457 PRINTS Ethylene responsive element binding protein signature 67 78 IPR001471 GO:0003700|GO:0006355
Lele16g0954 457 PRINTS Ethylene responsive element binding protein signature 111 131 IPR001471 GO:0003700|GO:0006355
Lele16g0954 457 MobiDBLite consensus disorder prediction 270 292 - -
Lele16g0954 457 MobiDBLite consensus disorder prediction 1 23 - -
Lele16g0954 457 ProSiteProfiles AP2/ERF domain profile. 66 129 IPR001471 GO:0003700|GO:0006355
Lele16g0954 457 MobiDBLite consensus disorder prediction 341 376 - -
Lele16g0954 457 MobiDBLite consensus disorder prediction 341 381 - -
Lele16g0954 457 SUPERFAMILY DNA-binding domain 65 130 IPR016177 GO:0003677
Lele16g0954 457 SMART rav1_2 66 135 IPR001471 GO:0003700|GO:0006355
Lele16g0954 457 MobiDBLite consensus disorder prediction 262 322 - -
Lele16g0954 457 Pfam AP2 domain 66 121 IPR001471 GO:0003700|GO:0006355
Lele16g0954 457 FunFam AP2-like ethylene-responsive transcription factor 65 131 - -
Lele16g0954 457 Gene3D AP2/ERF domain 66 130 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g0954 Lele-ChrLele16 5393425 5396595 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g0954 27 441 AP2-EREBP Transcription Factor Family AT2G41710 56.440 5.71e-139 405
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele16g0954 AP2 2.4e-09 CL0081