Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g0944 ATGGAAATTCTGCGCTTGTTGTGTCTTGTGGTTGCTTGGTATGTGTCAAAATCTGGTCTTGTAGTTGTGGGTGCTGAGCTACAGGATCAAACTATACTGCTGGCCCTTAACCAAGAGCTTAAAGTACCAAGATGGGATGCCAACAACTCAAGTTACTGCTCTTGGCGAGGTGTTAGCTGCAATGACCGCTCACTGGTAGTGAAGCTCGATCTGTCTCGTGCAAACCTCCGAGGTAATGTCACTCTAGTGTCCCAGCTCAAAGCTCTTAAGCAGCTTGACCTTTCAAATAACAATTTTCATGGTTACATTCCTCCGGCTTTTGGAAATTTATCTGATCTTGAAGTTCTCGATTTGTCTTCAAATAAGTTCGAAGGTTCAATTCCGCCAGAATTGGGCGGCCTCAGAAATCTTATATCGTTAAACCTTTCCAACAACTTGCTTGTGGGGAAAATACCAAGTGAACTTCATGGCCTAGAGAAATTGCAGGAGTTTCAAGTCTCTAGTAATCGATTGAATGGATCTCTACCTACTTGGCTGGGAAACTTAACCAGTCTGAGAGTTTTGGCTGCCTATGAGAATCTTCTAGGTGGCATGATTCCGGATAATCTTGGCTTGGCTTCTGAGCTTGAAATTGTTAACCTGCATTCAAACCAGCTTGAAGGCCCTATACCGGCTAGCATTTTTACTTCAGGGAAGCTGGAAGTTCTGGTTCTGACCCAGAACAATTTGAGTGGTGATCTTCCTCAAGAATTTGGGAATTGCCAAGGCCTTTCCAATATCCGAATTGGGAACAACCATCTAGTAGGTACTATTCCTAAGACCATCGGAAACATTAGTAGTCTTACCTACTTTGAAGCAGACAATAACAATCTTTCTGGTGAGGTAGTGTCAGAGTTTTCTCAGTGTTCTAATCTCACCCTTCTGAACTTAGCTTCGAATGGATTCAGTGGAACGATTCCACCAGAAATTGGACAGCTTATGAACCTGCAGGAACTAATTCTTTCTGGAAATAGCCTGTTTGGAAATATTCCAGAATCAATTTTGAGGTGCAGGAATCTTAACAAGCTTGATATAAGCAATAACAGGTTCAATGGAACACTCCCAAATGACATCTGCAAATTGTCTAGGCTTCAGTTCTTGCTATTGGGTCAGAATTCCATAGCAGGGGAGATCCCTCATGAAATTGGAAATTGTGCAAAACTTCTTGAGTTGCAAATGGGCAGTAACTATTTGACAGGATTTATCCCTCCTGAGATTGGTCACATTAGGATCTTGCAGATTGCTTTAAATTTGAGCTTCAATCATCTTCATGGATCCCTGCCTCCTGAGTTAGGAAGACTGGACAAACTTGTCTCTCTGGATGTTTCAAACAACAGGCTCTCAGGCAATATCCCAGCTGAGCTGAAGGGTATGTTGAGCTTGATAGAGGTTAACTTTTCAAATAATTTGCTCAGCGGCCCAGTACCCGCATTCGTGCCATTCCAAAAGAGTGCCAATTCAAGTTTTGTGGGTAATAAAAAGCTCTGTGGAGAGCCATTAAGCTCTTCATGTGGAGATCTTTATGATGACAGCAATAACTACCATCACAGAGTTTCTTACAGAATCATACTCGCGGTAATTGGTTCTGTGTTGGCAGTTTTTATGTCTGTTACTGTGGTGGTCTTGCTGTTTATGCTTAGGGAGAGGCAAGAAAAGGCAGCCAAAGATGCCGGGATGGTTGATGAAGAAACTAATAACAAACCAACCATAGTAGCAGGGAGTGTCTTTGTTGAGAATCTAAGACAAGCAGTAGACCTTGATGCTGTTATTAAGGCAACCCTCAAAGATTCTAATAAGCTCAGCAGTGGTACTTTCAGTACAGTTTACAAGGCAGTCATGCCTTCTGGGATGGTTCTATCTGTTAGGAGACTCAAGTCCATGGATAAGACAATAATCCACCACCAAAACAAGATGATTAGGGAACTTGAGAGGCTGAGCAAACTCTGTCACGACAATCTGGTTCGACCTATCGGATATGTCATTTATGAGGATTTTGCTCTTCTCTTGCATCATTTCTTACCCAATGGAACATTGGCTCAGTTTCTTCATGAATCTAGCAAGCAACCTGAATATCAACCCGACTGGCCTACTAGATTATCCATTGCCATCGGCGTGGCAGAAGGTCTGGCTTTCCTGCACCATGTGGCAATTATCCACCTTGACATTTCTTCTGGCAATGTTCTTTTGGATGCAAATTTCAAGCCTTTGCTTGGGGAGATTGAGATATCAAAACTTCTGGATCCAACCAGAGGTACCGCAAGTATTAGTGCTGTTGCTGGTTCCTTTGGATACATACCACCAGAATATGCATATACAATGCAAGTTACAGCACCTGGCAATGTCTACAGTTATGGTGTAGTTTTACTTGAGATCCTCATGACACGACCACCGGTTGATGAGGATTTCGATGAAGGCATAGATTTGGTGAAATGGGTTCATAGTGCTCCAGTAAGAGGGGAAACCCCGGAGCAGATACTCGATGCAAGGCTTAGCACAGTATCATTTGGTTGGAGGAAAGAAATGCTTGCCGCTTTGAAGGTTGCGTTGCTCTGCACTGATACTACACCTGCGAAACGACCTAAGATGAAGGTGGTAGTGGAAATGCTCCAAGAAATAAGGCAAACTTGA 2667 0.4297 MEILRLLCLVVAWYVSKSGLVVVGAELQDQTILLALNQELKVPRWDANNSSYCSWRGVSCNDRSLVVKLDLSRANLRGNVTLVSQLKALKQLDLSNNNFHGYIPPAFGNLSDLEVLDLSSNKFEGSIPPELGGLRNLISLNLSNNLLVGKIPSELHGLEKLQEFQVSSNRLNGSLPTWLGNLTSLRVLAAYENLLGGMIPDNLGLASELEIVNLHSNQLEGPIPASIFTSGKLEVLVLTQNNLSGDLPQEFGNCQGLSNIRIGNNHLVGTIPKTIGNISSLTYFEADNNNLSGEVVSEFSQCSNLTLLNLASNGFSGTIPPEIGQLMNLQELILSGNSLFGNIPESILRCRNLNKLDISNNRFNGTLPNDICKLSRLQFLLLGQNSIAGEIPHEIGNCAKLLELQMGSNYLTGFIPPEIGHIRILQIALNLSFNHLHGSLPPELGRLDKLVSLDVSNNRLSGNIPAELKGMLSLIEVNFSNNLLSGPVPAFVPFQKSANSSFVGNKKLCGEPLSSSCGDLYDDSNNYHHRVSYRIILAVIGSVLAVFMSVTVVVLLFMLRERQEKAAKDAGMVDEETNNKPTIVAGSVFVENLRQAVDLDAVIKATLKDSNKLSSGTFSTVYKAVMPSGMVLSVRRLKSMDKTIIHHQNKMIRELERLSKLCHDNLVRPIGYVIYEDFALLLHHFLPNGTLAQFLHESSKQPEYQPDWPTRLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDANFKPLLGEIEISKLLDPTRGTASISAVAGSFGYIPPEYAYTMQVTAPGNVYSYGVVLLEILMTRPPVDEDFDEGIDLVKWVHSAPVRGETPEQILDARLSTVSFGWRKEMLAALKVALLCTDTTPAKRPKMKVVVEMLQEIRQT 888
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g0944 888 Gene3D Transferase(Phosphotransferase) domain 1 686 888 - -
Lele16g0944 888 Pfam Leucine Rich Repeat 328 349 IPR001611 GO:0005515
Lele16g0944 888 FunFam Leucine-rich repeat receptor-like tyrosine-protein kinase PXC3 577 685 - -
Lele16g0944 888 Pfam Protein tyrosine and serine/threonine kinase 610 881 IPR001245 GO:0004672|GO:0006468
Lele16g0944 888 FunFam Leucine-rich repeat receptor-like kinase 28 129 - -
Lele16g0944 888 Pfam Leucine rich repeat N-terminal domain 31 61 IPR013210 -
Lele16g0944 888 CDD STKc_IRAK 613 885 - -
Lele16g0944 888 Gene3D Ribonuclease Inhibitor 275 523 IPR032675 -
Lele16g0944 888 SUPERFAMILY L domain-like 259 514 - -
Lele16g0944 888 Gene3D Phosphorylase Kinase; domain 1 570 685 - -
Lele16g0944 888 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 12 884 - -
Lele16g0944 888 FunFam Leucine-rich repeat receptor-like tyrosine-protein kinase PXC3 686 888 - -
Lele16g0944 888 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 130 223 - -
Lele16g0944 888 ProSiteProfiles Protein kinase domain profile. 607 888 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele16g0944 888 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 226 520 - -
Lele16g0944 888 Pfam Leucine rich repeat 88 147 IPR001611 GO:0005515
Lele16g0944 888 SUPERFAMILY Protein kinase-like (PK-like) 606 885 IPR011009 -
Lele16g0944 888 ProSitePatterns Tyrosine protein kinases specific active-site signature. 730 742 IPR008266 GO:0004672|GO:0006468
Lele16g0944 888 SMART LRR_typ_2 86 109 IPR003591 -
Lele16g0944 888 SMART LRR_typ_2 134 157 IPR003591 -
Lele16g0944 888 SMART LRR_typ_2 447 470 IPR003591 -
Lele16g0944 888 SMART LRR_typ_2 158 182 IPR003591 -
Lele16g0944 888 SMART LRR_typ_2 326 350 IPR003591 -
Lele16g0944 888 SMART LRR_typ_2 374 398 IPR003591 -
Lele16g0944 888 SMART LRR_typ_2 110 133 IPR003591 -
Lele16g0944 888 SUPERFAMILY L domain-like 42 295 - -
Lele16g0944 888 Gene3D Ribonuclease Inhibitor 170 274 IPR032675 -
Lele16g0944 888 Gene3D Ribonuclease Inhibitor 27 169 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g0944 Lele-ChrLele16 5349307 5352225 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g0944 9 887 Receptor kinase-like Gene Family AT2G41820 72.964 0.0 1285
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lele16g0944 PK_Tyr_Ser-Thr 2.7e-26 CL0016