Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g0922 ATGCGGGTCGGATCCGGATATAGTCGGGGCAAAGTTCCGGTGAACCGAATAAGAGTTGATTCAAAACTGGGAGTGCCGACCTTCTACCTTTTTCTACTTTTCTCTCTCTGTTGCCTCTGCCCCTGCCTCTGTCGCTGCTTTTCACGCGGTTCTGGTGTCTCTGGTGTTCGATTTCTACAACTATTGTCATTCGCCCTTTTAGGTGGTCAAAAAATAATGGAGTCTCATGATGAGACAGGATGCCAGGCACCAGATCGCACTATTCTTTGTATCAACAATTGTGGCTTCTTTGGCAGAGCTGCTACCATGAATATGTGCTCCAAATGTTACAAGGACATGCTGTTGAAGCAGGATCAGGCAAAACTTGCAGCATCATCAGTTGAAAACATTGTGAATGGCAGCTCTAACAGCAGCAGTGGGGAAGAGGCTAAGACTGTGTGTTCTACTGATGTACAAATTGGAACTGTGGAGTTCAAGACAATACATGCAGAAATTTGTCAGGATTCATCCTCTAGCAAGAGTTTAGAGATGAAAGTCAAGACTGGTCCCGGCAGATGTACGACTTGCCAGAAGCGTGTTGGATTAACTGGTTTTAGCTGCAAATGTGGGAACATTTTCTGTGCGTTGCATCGCTATTCCGACAAACACAATTGCCCTTTTGATTATCGGACAGTTGGTCAGGACGCTATAGCTAAAGCCAACCCTGTGGTTAAGGCAGAAAAGCTTGACAAAATCTAG 738 0.4539 MRVGSGYSRGKVPVNRIRVDSKLGVPTFYLFLLFSLCCLCPCLCRCFSRGSGVSGVRFLQLLSFALLGGQKIMESHDETGCQAPDRTILCINNCGFFGRAATMNMCSKCYKDMLLKQDQAKLAASSVENIVNGSSNSSSGEEAKTVCSTDVQIGTVEFKTIHAEICQDSSSSKSLEMKVKTGPGRCTTCQKRVGLTGFSCKCGNIFCALHRYSDKHNCPFDYRTVGQDAIAKANPVVKAEKLDKI 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g0922 245 Gene3D - 73 140 - -
Lele16g0922 245 ProSiteProfiles Zinc finger AN1-type profile. 180 226 IPR000058 GO:0008270
Lele16g0922 245 PANTHER AN1-TYPE ZINC FINGER PROTEIN 88 245 - -
Lele16g0922 245 SMART A20_3 87 111 IPR002653 GO:0003677|GO:0008270
Lele16g0922 245 FunFam Zinc finger AN1-type containing 6 159 241 - -
Lele16g0922 245 SUPERFAMILY AN1-like Zinc finger 176 240 IPR035896 -
Lele16g0922 245 Pfam A20-like zinc finger 88 111 IPR002653 GO:0003677|GO:0008270
Lele16g0922 245 Pfam AN1-like Zinc finger 186 222 IPR000058 GO:0008270
Lele16g0922 245 Gene3D - 161 241 IPR035896 -
Lele16g0922 245 ProSiteProfiles Zinc finger A20-type profile. 84 118 IPR002653 GO:0003677|GO:0008270
Lele16g0922 245 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 89 127 - -
Lele16g0922 245 SMART AN1_Zf_4 186 223 IPR000058 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g0922 Lele-ChrLele16 5217933 5220309 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g0922 77 245 C2H2 Transcription Factor Family AT3G52800 42.105 2.26e-38 130