Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g0921 ATGGCTACATTCTGTACATACCTGTTCCTTTTCTCTGTGGCCTTCTCAGCGTTCAATCTCGGTTCATCTTCTTCCTCCGAGGCGGATATCCTTCTCTCCTTCAAGGCCTCCATTGAAGACTCAAGGAAGGCTTTGTCAAGCTGGTCCAATACTTCTTCCACTCACTACTGTAACTGGACTGGAATCGCCTGCTCCACCACTTCTCCTTCTCCTTCTGTTACTTCCATTAATCTTCAGAACTTGAACCTTTCTGGGGACCTCTCATCTTCGATATGTGATCTTCCAAATCTGTCATACCTCAATCTTGCTGATAATATATTCAACTGGCCCATCCCTCTTCATCTTTCTCAGTGTAGTTCGTTAGAGACTTTGAATCTCAGTAATAATCTCATATGGGGAACCATCCCAATGCAGATTTCTCAGTTTGGTTCGTTGAGAGTGCTCGATTTCAGCAGAAATCACATAGAAGGAAATATCCCGAAAAGCTTGGGCTCCCTCAAGAACCTCCAAGTCCTTAACATGGGAAGTAACCAACTATCAGGTGATGTACCAGCCATCTTCATGAATTTAACCAAGCTTGCCGTTCTTGACTTGTCTGAAAATCCATACTTGGAAAGTGAGATTCCTGAGGGCATAGGCAAGCTTGGAAGTCTCAAGCAACTTCTGTTGCAAAGTTCTGGTTTTCACGGTGAAATTCCGGATTCTTTTGCGAACCTGCGTAGTTTGACCCATTTAGACCTCTCTCAGAACAATCTAACCGGTAAGATTCCTCAGGGTCTGGCTTCTTCTCTCAAGAACCTGGTGTCTTTTGATGTTTCACAGAACAAGCTTTCGGGGTCATTTCCAAATGGCATTTGTAATACAAAAGGTCTCATAAATCTCAGTCTCCATACAAATATTTTCGGGGGTCCAGTACCCAACACCATTGGTGAATGTAAGAATCTTGAGAGATTTCAAGTTCAGAACAACGAGTTAACTGGAGACTTCCCTTATTCATTATGGTCATTACCTAAAGTTAAGCTCATTAGAGCCGAAAACAACAGATTCTCAGGACAGATACCTGAGTCCATATCGGGAGCTGTTCAGTTGGAGCAAGTTCAGCTTGACAATAACAGCTTTGCCGGTAAAATTCCTCAGAGTCTTGGGCTGGTCAAGAGCTTATACAGATTCTCTGCGTCTCTCAATCGTTTCTACGGAGAACTTCCTGTAAACTTTTGTGATTCCCCTGTTATGAGTATTGTGAATCTCTCTCACAATTCCCTCTCTGGTCAAATCCCAGAGCTGACAAAATGCAGGAAACTCGTTTCATTGTCTTTAGCAGACAATAGTCTCACCGGACAAATCCCTCCCTCCCTTGCTGAGTTGCCAGTGCTAACTTATCTTGATCTTTCAGCTAACAATCTCACTGGTTCAATCCCACTAGGACTTCAAAATTTAAAGCTTGCTCTTTTCAATGTGTCCTTCAATCGGCTATCTGGTAAGGTACCTTACTCCTTGATTTCTGGTCTCCCTGCCTCATTTTTGGAAGGAAACCCTGAACTTTGTGGCCCTGGATTACCCACTTCCTGTTCTGATGACCCTCAAAGACACCATTCCGGGGGTCTCATTGCCCTAGCATGTGCCCTTATCTCTGTAGCCTTCGTTGTAGGAACTGCTATGTTTGTTGGTGGATTCATTTTGTATAGGAAGTCTAGTAAGAGGAATCAAATAGGGGTTTGGCGCTCAGTGTTCTTCTATCCTCTTAGAATTACTGAGCAAGATCTGCTTATAGGAATGGATGAGAAAAGCTTGATTGGAAATGGTGGGGTTTTTGGCAAAGTTTTTGATGTGAGTTTACCCAGCGGTGAACAAGTGGCTGTAAAGAAGCTGGTGAATTTTGGGAACCAGACGTCAAAAAGTTTGAAAGCTGAGGTCAAGACATTGGCTAAGATTAGGCATAAGAATGTTGTAAAAATCCTGGGGTTTTGCCATTCTGATGAGTCAGTCTTTCTCATTTATGAGTACTTGCAAGAAGGAAGCTTAGGGGACTTGATTTCCCGCGAGGATTTTGAGTTGCAGTGGGAGGCAAGATTGAGGATTGCCATCAGGGTCGCTCAAGCGCTAGCTTATCTTCACAATGACTATGTTCCTCACTTGCTTCACAGAAACGTAAAGTCCAGAAACATTCTGCTGGATGCAGACTTTGAGCCAAAACTCACAGATTTTGCTCTTGATCGAATTGTAGGAGAAGCCTCATTTCAGTCAACTGTTGCTTCTGAAGCAGCATCTTCCTGCTATAATGCTCCAGAATACGGATACAGTAAGAAAGCATCTGAAGAATTGGACATATACAGCTATGGGGTTGTATTGCTAGAGCTTGTGACTGGGAAGCAAGCAGAGCAAGCAGTATCAACAGAGTCTCTTGACATAGTGAAGTGGGTTCGAAGGAGAGTGAACATCACTGATGGGGTGAATCAAGTTCTGGATCCCAAAATATCACATTCAAATCAGCAAGAAATGATTGGAGCCCTGGAAATTGCTCTTCGTTGCACTTCCGTTGTGCCACAAAAGAGACCGTCGATGGTAGAAGTTGCACGAGCTCTTCAGTCCCTTGAGTCATAA 2601 0.4352 MATFCTYLFLFSVAFSAFNLGSSSSSEADILLSFKASIEDSRKALSSWSNTSSTHYCNWTGIACSTTSPSPSVTSINLQNLNLSGDLSSSICDLPNLSYLNLADNIFNWPIPLHLSQCSSLETLNLSNNLIWGTIPMQISQFGSLRVLDFSRNHIEGNIPKSLGSLKNLQVLNMGSNQLSGDVPAIFMNLTKLAVLDLSENPYLESEIPEGIGKLGSLKQLLLQSSGFHGEIPDSFANLRSLTHLDLSQNNLTGKIPQGLASSLKNLVSFDVSQNKLSGSFPNGICNTKGLINLSLHTNIFGGPVPNTIGECKNLERFQVQNNELTGDFPYSLWSLPKVKLIRAENNRFSGQIPESISGAVQLEQVQLDNNSFAGKIPQSLGLVKSLYRFSASLNRFYGELPVNFCDSPVMSIVNLSHNSLSGQIPELTKCRKLVSLSLADNSLTGQIPPSLAELPVLTYLDLSANNLTGSIPLGLQNLKLALFNVSFNRLSGKVPYSLISGLPASFLEGNPELCGPGLPTSCSDDPQRHHSGGLIALACALISVAFVVGTAMFVGGFILYRKSSKRNQIGVWRSVFFYPLRITEQDLLIGMDEKSLIGNGGVFGKVFDVSLPSGEQVAVKKLVNFGNQTSKSLKAEVKTLAKIRHKNVVKILGFCHSDESVFLIYEYLQEGSLGDLISREDFELQWEARLRIAIRVAQALAYLHNDYVPHLLHRNVKSRNILLDADFEPKLTDFALDRIVGEASFQSTVASEAASSCYNAPEYGYSKKASEELDIYSYGVVLLELVTGKQAEQAVSTESLDIVKWVRRRVNITDGVNQVLDPKISHSNQQEMIGALEIALRCTSVVPQKRPSMVEVARALQSLES 866
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g0921 866 SMART LRR_typ_2 264 288 IPR003591 -
Lele16g0921 866 SMART LRR_typ_2 190 215 IPR003591 -
Lele16g0921 866 SMART LRR_typ_2 455 478 IPR003591 -
Lele16g0921 866 SMART LRR_typ_2 239 263 IPR003591 -
Lele16g0921 866 SMART LRR_typ_2 166 189 IPR003591 -
Lele16g0921 866 Gene3D Ribonuclease Inhibitor 261 526 IPR032675 -
Lele16g0921 866 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 8 863 - -
Lele16g0921 866 Pfam Leucine rich repeat 120 179 IPR001611 GO:0005515
Lele16g0921 866 Pfam Leucine rich repeat 217 277 IPR001611 GO:0005515
Lele16g0921 866 FunFam - 587 668 - -
Lele16g0921 866 Pfam Leucine rich repeat N-terminal domain 25 65 IPR013210 -
Lele16g0921 866 Gene3D Ribonuclease Inhibitor 23 204 IPR032675 -
Lele16g0921 866 ProSiteProfiles Protein kinase domain profile. 593 864 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele16g0921 866 Gene3D Ribonuclease Inhibitor 205 260 IPR032675 -
Lele16g0921 866 FunFam Leucine-rich repeat receptor-like tyrosine-protein kinase PXC3 669 866 - -
Lele16g0921 866 PRINTS Leucine-rich repeat signature 455 468 - -
Lele16g0921 866 PRINTS Leucine-rich repeat signature 242 255 - -
Lele16g0921 866 SUPERFAMILY L domain-like 207 522 - -
Lele16g0921 866 FunFam Probably inactive leucine-rich repeat receptor-like protein kinase At5g06940 262 526 - -
Lele16g0921 866 FunFam Leucine-rich repeat family protein 26 184 - -
Lele16g0921 866 Gene3D Phosphorylase Kinase; domain 1 586 668 - -
Lele16g0921 866 SUPERFAMILY L domain-like 24 287 - -
Lele16g0921 866 Pfam Protein kinase domain 594 858 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele16g0921 866 Gene3D Transferase(Phosphotransferase) domain 1 669 866 - -
Lele16g0921 866 SUPERFAMILY Protein kinase-like (PK-like) 595 861 IPR011009 -
Lele16g0921 866 ProSiteProfiles Leucine-rich repeat profile. 77 98 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g0921 Lele-ChrLele16 5209223 5211945 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g0921 31 864 Receptor kinase-like Gene Family AT5G06940 63.766 0.0 1046
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lele16g0921 Pkinase 1.5e-39 CL0016