Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g0918 ATGGCTGCACCCGCTGAAAATGCGAGCTCATTCACTGCACTTCTCGAACTCCCACCACCGCAAGCCGTCGAGCTCCTTCACTTGCCGGACTGTAGCGGAACCGCCGCCACTAGCAGCGTGTCTGCGAAATCCCTTTGCCAAATCAACAATCAGAAACCCTATCTACTCCACTCTTTCAGTGCTTTGATCGAGCGCGCTGCCAAGTTCTCAGTGTTTGCCGGGGAAAACTCCCCCCCAGAGGATTCCAGCTTGGTTGGACCTAATTCGGGTGCCAATTCGGATAAAGTAAAGAATGAGCCCCCAGAAAGCGATTCGAATCCTAGTTCAATGCAGGGTTGTGTTTCTGATCCCGCCATTGAGAAACCGAACCAGAAGGCCGCAAAGAGGAAGGAGCGAGAAAAGAAGGTTGAAGGGTCCTCAAAGAAGAGTAAGGGCGTCGCCGACGAGGCCTCCGGGGAAGCTGAAAAGCTTCCCTACGTTCACGTTCGAGCTCGTCGAGGTCAAGCTACAGACAGCCATAGCTTAGCAGAAAGGGCTAGGAGAGAAAAGATAAATGCTCGGATGAAGCTTTTACAAGAGCTGGTCCCCGGCTGCAAAAAGATATCAGGAACTGCGTTGGTTCTGGATGAAATCATCAACCATGTGCAATCTCTACAACAGCAAGTGGAGTTCTTATCAATGAAATTGGCTGCGGTTAATCCAAGAATTGACTTCAACCTTGACAGCATATTGGCTTCAGAAGGTGCATCTCTCATGGATTGTAACTTCCCCAGCACGGTTGCCCCTTTGATGTGGCCAGAAATCCCAGTCAATAGAAACAGACAACAATATCAACAACAGTGGCAAGTTGATGCATTCCCACAACCACTTTGGGGGAGAGAAGGAAACCATAATTTTATCACTCCAGATAACTCTTTTTTGAGTTATGACTCGTCAGCAAATTCAGCATCACTGCACTCAAATCAGTTGAAGATGGAGCTCTGA 984 0.4878 MAAPAENASSFTALLELPPPQAVELLHLPDCSGTAATSSVSAKSLCQINNQKPYLLHSFSALIERAAKFSVFAGENSPPEDSSLVGPNSGANSDKVKNEPPESDSNPSSMQGCVSDPAIEKPNQKAAKRKEREKKVEGSSKKSKGVADEASGEAEKLPYVHVRARRGQATDSHSLAERARREKINARMKLLQELVPGCKKISGTALVLDEIINHVQSLQQQVEFLSMKLAAVNPRIDFNLDSILASEGASLMDCNFPSTVAPLMWPEIPVNRNRQQYQQQWQVDAFPQPLWGREGNHNFITPDNSFLSYDSSANSASLHSNQLKMEL 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g0918 327 MobiDBLite consensus disorder prediction 122 154 - -
Lele16g0918 327 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 168 218 IPR011598 GO:0046983
Lele16g0918 327 Pfam Helix-loop-helix DNA-binding domain 172 219 IPR011598 GO:0046983
Lele16g0918 327 SMART finulus 174 224 IPR011598 GO:0046983
Lele16g0918 327 CDD bHLH_AtBPE_like 158 243 - -
Lele16g0918 327 FunFam transcription factor bHLH48-like isoform X1 165 237 - -
Lele16g0918 327 MobiDBLite consensus disorder prediction 81 113 - -
Lele16g0918 327 Gene3D - 165 238 IPR036638 GO:0046983
Lele16g0918 327 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 77 295 IPR024097 GO:0006355
Lele16g0918 327 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 166 237 IPR036638 GO:0046983
Lele16g0918 327 Coils Coil 208 228 - -
Lele16g0918 327 MobiDBLite consensus disorder prediction 74 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g0918 Lele-ChrLele16 5190531 5194420 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g0918 4 327 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G57800 55.899 9.85e-100 297
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele16g0918 HLH 8.8e-06 No_clan