Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g0916 ATGGATTTGAATTCGCATCAGAATTATCAGCCACAACAGCATCAATCCAATTCAGGATTGGCCCGGTTTCGCTCTGCGCCCAGCTCGTTTCTCGCTAATTTCAGACAAGCTGCTGAATCTGTTGAATCCGATAGACGAATTTCGAGATTCGCACACAGCAGAAATAGCAACGATACGGCGTCGCCGAGCTTTCAAGAATTCGAATCCAAACACAAACCGCCTAAATCTCCATCGGAGACTGCTCTGAACCGTATGAATTCCCAGCAAGGCTATGGTGGCGGCGGCCTACCGCCTCACTATCCAAGGCATAGTTCTTCTTATAGTTCATCCATGGATAGCTCCTCTGGACTGATGGGTTCAATGGGAATGGATCACGAAGCTCAGCCAAAAAGCTTTGCTTCGTCTCTTCTTAGGCAAAGTAGCTCCCCTGCCGCTCTTTTCTCCAATATCTCATTTCCTAATGGGTATGGCATCATTAAAGACGTAAGAAACTATGGTGGGGTGAACGGCAATAGTAATGGTGGACTTACTCCATCTATCAACGGATTGAAGAATCAGATTAACTTCTCATCAAGAAGTACCTCCCTGGGAGCCCTGTCCCAGATCTCTGAAATAGAATGTGAAGGTATTGAAGCAACAAGCCCAGATGATGGTAGGGTGGGAACTAATAACAGTGGTGATACTCGGTATTATGGCCCCGGCTTCCCTTATGCCTCCGGGAATGATAACTCACATGTCTCAGAAAATCTCAATGGTTTTAAAAGAGATCAAACTAGTAATGAAAAGTTGTATTCTGATGCTCAGGTAAGAAGAACTCGTATCAGTGAACGGATGAAGAAGTTACAAGATCTCGTCCCAAAAATGGACAAGCAAACAAACACGGCAGACATGTTGGACTTGGCTGTCGTGTATATTAAAGATCTTCAGAAACAATTCAAGGCTCTGAGTGAGAAGCGGGCAAACTGCAGATGTACGAGCACTCAGAAAGCAGAAGCAAATTAA 1002 0.4491 MDLNSHQNYQPQQHQSNSGLARFRSAPSSFLANFRQAAESVESDRRISRFAHSRNSNDTASPSFQEFESKHKPPKSPSETALNRMNSQQGYGGGGLPPHYPRHSSSYSSSMDSSSGLMGSMGMDHEAQPKSFASSLLRQSSSPAALFSNISFPNGYGIIKDVRNYGGVNGNSNGGLTPSINGLKNQINFSSRSTSLGALSQISEIECEGIEATSPDDGRVGTNNSGDTRYYGPGFPYASGNDNSHVSENLNGFKRDQTSNEKLYSDAQVRRTRISERMKKLQDLVPKMDKQTNTADMLDLAVVYIKDLQKQFKALSEKRANCRCTSTQKAEAN 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g0916 333 MobiDBLite consensus disorder prediction 1 24 - -
Lele16g0916 333 SMART finulus 264 314 IPR011598 GO:0046983
Lele16g0916 333 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 258 308 IPR011598 GO:0046983
Lele16g0916 333 MobiDBLite consensus disorder prediction 36 125 - -
Lele16g0916 333 Gene3D - 267 331 IPR036638 GO:0046983
Lele16g0916 333 CDD bHLH_AtbHLH_like 267 316 IPR045239 -
Lele16g0916 333 Coils Coil 305 325 - -
Lele16g0916 333 Pfam Helix-loop-helix DNA-binding domain 270 309 IPR011598 GO:0046983
Lele16g0916 333 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 268 324 IPR036638 GO:0046983
Lele16g0916 333 MobiDBLite consensus disorder prediction 102 117 - -
Lele16g0916 333 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 24 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g0916 Lele-ChrLele16 5167852 5169945 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g0916 1 314 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G42280 35.038 1.30e-39 141
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele16g0916 HLH 4e-07 No_clan