Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g0909 ATGTCTTCCAGTATCAACCAAACAACTACTCAACATGAACCACTTCTACCTCCTCCGCATCGTCATCATCACCGCCGCCACCATCAGCAACCACAGCAAGATCATCATGTTTCTTTCGGAATAATGCAATCTTCTTCTCCGTCGACGTTTTCTGTCCCCGGAAACTACCTAAGCAAGGATTCTGGAGCTTATGATCTGGGAGATTTGGATCTAGCCCTTTTTCTCTATCTCGATGGACAACAAGACTCAGCCAGTGTTCAACACCAAAGACCAGAGAACTCATCCTCGTCAGAAATGAAGCCTCCCACTCTCAACATGTTCCCTGCCCAACCTATGCACACACACCCGCCCTCAACCAAGGCTAACATGGAAGTAGTTCCTCCGAGAGCCAGTGGTCCCAAAGCTCCATCAGAGCCGTCAATGGATTTTGCCAACCCACGAAACGAAGCCGCCTCGGCCCCTGAACCACCCAATTCCAAAACTGTCAAGCGAGAGAGCAATCGCAAGGGTCCAACGCCAAGTTCTGAGCAGGAAGCTCCCAAAACCCCAGATCCTAAGACTCTAAGAAGACTTGCTCAGAATAGAGAAGCAGCTAGGAAAAGCAGGCTCAGGAAAAAGGCATATGTTCAGCAGCTAGAGTCAAGTAGAATTAGGCTTAATCAACTGGAGCAGGAGCTACATCGTGCTAGAGCTCAAGGAGTATTTTTAGCGGGAGGTGCAGCTTTGGGAGGAGAGCAAGGCCTTCCTATGGCTATGAGCAGCATTAGCTCAGATGCGGCAATGTTCGACGTAGAATATGCGAGTTGGCTAGAAGAGCACCATAGAATAGTGTGCGAGCTAAGAGCTGCAGTTCAAGAGCACCTTCCAGAGAACGAGCTTCGGCTGTTTGTAGATAATTGCTTGGCACATTATGACCAATTAACGAATCTCAAGGGCGTGGTGGCCAAAACAGACGTATTCCACATTGTGTCTGGCATGTGGAAGACCCCAGCCGAACGTTGCTTCATGTGGATCGGCGGGTTCAGGCCATCAGAACTCATTAAGATAATTGTGAGTCAAATTGAACCGCTGACGGAGCAACAAATACTGGGTATATATGGGTTGCAGCAGTCAACGCAAGAGGCAGAAGATGCTCTCTCCCAAGGGCTTGAGGCTCTCAATCAATCTCTTTCAGACACTATAACATCTGACTCACTGAGCTGTCCGCCCAACATGGCTAACTACATGGGACAGATGGCCATGGCCATAAATAAGCTCTCCACTCTAGAAGGTTTCGTGAGACAGGCAGATAATCTGAGGCAACAGACGATTCACCGGCTGCATGAGATATTGACGACGCGTCAGGCGGCGAGATGTATGCTGGCGATGGCCGAGTACTTCCATCGTCTAAGAGCTCTCAGTTCTCTGTGGATGGGACGACCTCGTCAAGAATAA 1434 0.493 MSSSINQTTTQHEPLLPPPHRHHHRRHHQQPQQDHHVSFGIMQSSSPSTFSVPGNYLSKDSGAYDLGDLDLALFLYLDGQQDSASVQHQRPENSSSSEMKPPTLNMFPAQPMHTHPPSTKANMEVVPPRASGPKAPSEPSMDFANPRNEAASAPEPPNSKTVKRESNRKGPTPSSEQEAPKTPDPKTLRRLAQNREAARKSRLRKKAYVQQLESSRIRLNQLEQELHRARAQGVFLAGGAALGGEQGLPMAMSSISSDAAMFDVEYASWLEEHHRIVCELRAAVQEHLPENELRLFVDNCLAHYDQLTNLKGVVAKTDVFHIVSGMWKTPAERCFMWIGGFRPSELIKIIVSQIEPLTEQQILGIYGLQQSTQEAEDALSQGLEALNQSLSDTITSDSLSCPPNMANYMGQMAMAINKLSTLEGFVRQADNLRQQTIHRLHEILTTRQAARCMLAMAEYFHRLRALSSLWMGRPRQE 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g0909 477 Pfam bZIP transcription factor 186 216 IPR004827 GO:0003700|GO:0006355
Lele16g0909 477 CDD bZIP_HBP1b-like 186 238 - -
Lele16g0909 477 MobiDBLite consensus disorder prediction 84 103 - -
Lele16g0909 477 PANTHER TRANSCRIPTION FACTOR TGA9 109 476 - -
Lele16g0909 477 Coils Coil 205 232 - -
Lele16g0909 477 SMART brlzneu 182 255 IPR004827 GO:0003700|GO:0006355
Lele16g0909 477 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 184 228 IPR004827 GO:0003700|GO:0006355
Lele16g0909 477 FunFam BZIP family transcription factor 185 234 - -
Lele16g0909 477 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 189 204 IPR004827 GO:0003700|GO:0006355
Lele16g0909 477 SUPERFAMILY Leucine zipper domain 186 228 IPR046347 GO:0003700|GO:0006355
Lele16g0909 477 Pfam Seed dormancy control 277 352 IPR025422 GO:0006351|GO:0043565
Lele16g0909 477 ProSiteProfiles DOG1 domain profile. 259 473 IPR025422 GO:0006351|GO:0043565
Lele16g0909 477 MobiDBLite consensus disorder prediction 84 188 - -
Lele16g0909 477 MobiDBLite consensus disorder prediction 1 36 - -
Lele16g0909 477 Gene3D - 185 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g0909 Lele-ChrLele16 5140760 5146008 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g0909 54 477 Basic region leucine zipper (bZIP) Transcription Factor Gene Family AT5G06839 62.584 0.0 532
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lele16g0909 DOG1 4.3e-31 No_clan