Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g0905 ATGGTATCAGGAGCTTCCCGGTTTGAATCCATGGAGACATCCTCGCACACCTCAGGTTCTGTTGATTCGTTCACTGCTCAGAGAAAGGATATTAATTTACACCACTTCCCCTCCTGCTACTATTCACTTATGAGTTCCCCCTCTGCTAATGCGGCGGCCGCCTCCAACTCCCCGACGGAGTCCTTGAACGGCTTGAAATTCGGGCAGAAGATATACTTTGAGGATGTGGGCGTGGGTAGTGGCGTGAAATCCAGCGGTGGGGGTGGGGCGTCGTCGTCGTCGTCCTCAGGGCTGACCCCGCCTAAGAAGGGAAGGGGTAGTGGGGCTCAGGGGGCTCAGCCTCCGAGGTGTCAGGTGGAGGGCTGCAAAGTAGATCTGAGTGATGCCAAGGCTTACTATTCCAGACATAAAGTCTGTAGTATGCACTCCAAATCACCCAGGGTCGTGGTCGCAGGTCAAGAGCAAAGGTTTTGCCAACAGTGTAGCAGGTTTCACCAGCTTTCTGAATTTGATCAAGTAAAGCGAAGTTGTCGCAGGCGGCTTGCTGGTCATAATGAACGGAGGAGAAAACCCCCATCCAGCTCCTTGATGGCTTCTCGATATGGCCGACTTGCTCCAGCTAATTTTGATAACAGCAATAGCAGAGGTGGTGGATTTCTGATGGAATTCGCTTCATATCCAAAACTTAGCCTGAGAAATTCAATGCCAACACCAACATCATCTGAGCAGCTTCCTGGGAATCCAGCTGTGACACTTCCATGGCAGGGCCATTCGGAGTCTCCATCATTGCTTTTCTTGCAGGCAGGTTGTTCTCCAGTTTGTGGGACAAGCTACTCTAGATCCAGAAATTCTTCATCAGGGGAAAGCTTCTCAGGATTGACGGACTCAAGCTGTGCTCTCTCTCTTCTGTCAAACCAAGCTTGGGCCCCTCGAAACGGAGCACCAAGTCTTGGTACAAATAATTTGATGAACTTTGACGACACGCCCATCACATACCTCCCCGCATCTTCTCATCATGGACACGGTACATCCCTTCGCCATCAACTTTCAAACGCCTCATGGTGTTACAAGGGCATTGATGCTGCTGCTGCTGATAACTGTTCTCATGACATTGGCCCTGACCTTGGCCTGGGCCACCAAATTTCGCAGCCCATCAGCAGCTCTCTCCCTGGGGAGTTTGACGTGTCACAGCAGGGCAGGAGGCATTACATGGATCTAGAGCAGTCCAGGGGGTTTGACGATTCTCAGCATCACGTGCACTGGATCAGACAGTATTTTGGTTTGTCGGAAGGCCTGCTACACTCCACATCTCTGAAACAACTACTAATAATCAACAAACAAGAAAATCAGCACTTCAGTCTTTCGTCAAACTTGGATGACACTGTTCCCTCGCCCAATTTCTGCAGCTCCCTTGTTTTAGCCAGAGCTGCATCCTACAATTCACACAAGGAAAATGCGGAAAACAGACCAGCCCGCCAGCTCAGCAAGCAGGGCGAGGAGCAACCGAGCAAGACTGCAAAGCGAGTCCGAGAGTCCAGAAGCTCTAAATCTGATCGATTGATACTCTCATTCTGCTCTCACAGGCGTCTCCCTTATGAAGATAGGTTTCAAAATGGTGTAGATAAATGTCAAAGATGCGTGCAGAAAATCATGGACCCTGCAGAACGAAGGTACTTGGAGGATGAGGATACACCAACAATGAAAACTTTGAAAGGCGCAACGACTGGTTTAGTTGCTGGTACCATCTGGGGAACCATAGTTGCCACTTGGTATGACGTTCCTCGTGTTGAGAGAAATGTTGCTCTTCCGGGGCTGTTGCGAACTTTGAAGATGATGGGCAACTATGGGATGACATTTGCTGCAATAGGAGGAGTCTTCATAGGAGTGGAACAATTGGTGCAACACTATAGGGCAAAGAGGGACTTTATTAATGGGGCTGTTGGTGGTTTTGTTGCTGGGTCAACTATTCTGGGTTACAAAGGTAGGAGCATCTCAACTGCAATTTCTGCTGGAACGGCATTGGCAGTGACTTCTTCAATTATTGACATTGGGGGTCAGACTACAAGAATTGACAACGGGAAGGAGTATTATCCTTACACCACCAAGAAAAGATCCAATGTTGATTCATAA 2130 0.4906 MVSGASRFESMETSSHTSGSVDSFTAQRKDINLHHFPSCYYSLMSSPSANAAAASNSPTESLNGLKFGQKIYFEDVGVGSGVKSSGGGGASSSSSSGLTPPKKGRGSGAQGAQPPRCQVEGCKVDLSDAKAYYSRHKVCSMHSKSPRVVVAGQEQRFCQQCSRFHQLSEFDQVKRSCRRRLAGHNERRRKPPSSSLMASRYGRLAPANFDNSNSRGGGFLMEFASYPKLSLRNSMPTPTSSEQLPGNPAVTLPWQGHSESPSLLFLQAGCSPVCGTSYSRSRNSSSGESFSGLTDSSCALSLLSNQAWAPRNGAPSLGTNNLMNFDDTPITYLPASSHHGHGTSLRHQLSNASWCYKGIDAAAADNCSHDIGPDLGLGHQISQPISSSLPGEFDVSQQGRRHYMDLEQSRGFDDSQHHVHWIRQYFGLSEGLLHSTSLKQLLIINKQENQHFSLSSNLDDTVPSPNFCSSLVLARAASYNSHKENAENRPARQLSKQGEEQPSKTAKRVRESRSSKSDRLILSFCSHRRLPYEDRFQNGVDKCQRCVQKIMDPAERRYLEDEDTPTMKTLKGATTGLVAGTIWGTIVATWYDVPRVERNVALPGLLRTLKMMGNYGMTFAAIGGVFIGVEQLVQHYRAKRDFINGAVGGFVAGSTILGYKGRSISTAISAGTALAVTSSIIDIGGQTTRIDNGKEYYPYTTKKRSNVDS 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g0905 709 MobiDBLite consensus disorder prediction 83 116 - -
Lele16g0905 709 Pfam Tim17/Tim22/Tim23/Pmp24 family 568 677 - -
Lele16g0905 709 Pfam SBP domain 117 190 IPR004333 GO:0003677
Lele16g0905 709 MobiDBLite consensus disorder prediction 481 514 - -
Lele16g0905 709 MobiDBLite consensus disorder prediction 1 22 - -
Lele16g0905 709 SUPERFAMILY SBT domain 115 196 IPR036893 GO:0003677|GO:0005634
Lele16g0905 709 MobiDBLite consensus disorder prediction 85 101 - -
Lele16g0905 709 ProSiteProfiles Zinc finger SBP-type profile. 114 191 IPR004333 GO:0003677
Lele16g0905 709 MobiDBLite consensus disorder prediction 6 22 - -
Lele16g0905 709 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 44 410 IPR044817 GO:0003677
Lele16g0905 709 FunFam Squamosa promoter-binding-like protein 14 108 178 - -
Lele16g0905 709 Gene3D - 107 178 IPR036893 GO:0003677|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g0905 Lele-ChrLele16 5099952 5110922 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g0905 65 421 SBP-box Gene Family AT2G42200 42.257 2.36e-58 200
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Lele16g0905 Tim17 6.3e-13 No_clan