Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g0893 ATGGAAATCGATTCGGAGAAGAGTCTGTGCAGAGCGCTTTGTGCCTACAACTCCACGGATGAAGTGTTTGCAATTCAGAAAGAAACGTATAGGGGGCAGCAATACAGTCAGATTTACTTTGCTCGTCTTCACTTGATGAGAACTCTCCTGTATTCACTTGTATCCCAGTGGAAACCTCATTTACCCGTATGCACAGTGTTGGGACTGGAGGAGGGCAAGGAATGTATCATCGTTGGAACCCTTTATAAACACATGAAGCTTAAACCTTGCATACTTGATGAGTATTCTAAGGAGAGATCTAAAACGCCACTCGTCAAGCCTCATAACTTCATGCACCCAGATGATCATCTAATTTTGGAAGATGAAAGTGGGAGAGTTAAGCTCAGCGGGGATCTCATTTCACCTTCTGTGTATGTAACAGGGATCGTAGTTGCTATACATGGAAAAGAAACTGGGGCTGGTGATTTTTTGGTTCTAGATGTCCTGGAAGCAGGCCTACCACCACAAATAGAACTTCCTCTTAAATCAAGGGAGGACAAATATGTTGTTTTTGTGTCCGGGTTAAGTGTTGGAAGCAGCAACTCTAATCCTCTCCAATTTCAGCTCTTCATTGATCATATTACTGGTCATTTAGGAGATGAGAAGGAGCAAATTTTGGCATCTCAAATCGCTCATGTTGTCATAGCTGGGAATTCTGTTGAATTCCCTCGTGAACTTCTTAACGGGCAGAATTTGGCTGCAAAGGATCTCTCAAGGTTGTCTGAACCAATAAAGGAACTTGATATTCTGTTGAATCAGATCGCTGTAGGTTTGCCTTTGGATATCATGCCAGGACCCAGGGACCCAGCTAACTACTCATTACCACAGCAGCCTCTGCACAGATGCCTTTTCCCTGGGTCATCTGCTTATAACACTTTCAGATCCTGCACAAATCCTCACTGCTTTGAGCTTGATAATATTAGATTTCTCGCGACATCAGGTCAAAATATAGATGATCTTGACAAGTATTCAGAGGCCATAGATAAACTTGAATTCATGGAAAGGACTTTACGGTGGAGACATTTGGCACCAACAGCACCTAATACCCTTGGGTGCTATCCTTTCACTGATAGGGATCCTTTCTTCCTTGAAAGCTGCCCCCATGTGTATTTTGTTGGCAACCAAGATAAATATGAAACTCGTGTGATTGAGGGATCAGAAGGGCAGTTGGTGAGACTCATTTGCGTTCCTAAATTCAATGAGACTGGAGTTGCTGTTATGCTAAATCTGAGGGATCTCGAATGTCATGCCCTTAGCTTTGGGACGCAATTCAGCTCTTAA 1320 0.4318 MEIDSEKSLCRALCAYNSTDEVFAIQKETYRGQQYSQIYFARLHLMRTLLYSLVSQWKPHLPVCTVLGLEEGKECIIVGTLYKHMKLKPCILDEYSKERSKTPLVKPHNFMHPDDHLILEDESGRVKLSGDLISPSVYVTGIVVAIHGKETGAGDFLVLDVLEAGLPPQIELPLKSREDKYVVFVSGLSVGSSNSNPLQFQLFIDHITGHLGDEKEQILASQIAHVVIAGNSVEFPRELLNGQNLAAKDLSRLSEPIKELDILLNQIAVGLPLDIMPGPRDPANYSLPQQPLHRCLFPGSSAYNTFRSCTNPHCFELDNIRFLATSGQNIDDLDKYSEAIDKLEFMERTLRWRHLAPTAPNTLGCYPFTDRDPFFLESCPHVYFVGNQDKYETRVIEGSEGQLVRLICVPKFNETGVAVMLNLRDLECHALSFGTQFSS 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g0893 439 Gene3D - 40 164 - -
Lele16g0893 439 Pfam DNA polymerase alpha/epsilon subunit B 182 391 IPR007185 GO:0003677|GO:0006260
Lele16g0893 439 FunFam DNA polymerase delta small subunit 167 439 - -
Lele16g0893 439 FunFam DNA polymerase delta subunit 2 40 164 - -
Lele16g0893 439 Pfam DNA polymerase delta subunit OB-fold domain 34 161 IPR040663 -
Lele16g0893 439 CDD MPP_PolD2_C 181 433 IPR041863 -
Lele16g0893 439 PANTHER DNA POLYMERASE DELTA SUBUNIT 2 12 433 IPR024826 -
Lele16g0893 439 Gene3D - 173 438 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g0893 Lele-ChrLele16 5026869 5031952 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g0893 1 438 Core DNA Replication Machinery Family AT2G42120 78.082 0.0 729