Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g0891 ATGTTTTCGTGGTTGGCAAGGATAGTTTCTGCGTGCTTGAGGCCGGTCAGGCGGTATGCCCGCATGAACAAGGATGACGTGGATGATCCTTCCTCGAATGATGACTCTCTTCTATGGTATAAGGACCTCGAGAAACACTCGTGCGGCGAATTCTCTTATGCTGTGGTTCAGGCCAATGAAATTATCGAGGATCACAGCCAGGTCGAGACTGGCTCCGACGCAATGTTCATCGGAGTGTACGACGGCCACGGCGGTCCCGAAGCGTCTCGGTTCATCAGCGACCACCTCTTCCATCATCTAATGAGGATAGCTCGAGATAATGGTACTATATCTGAAGATATCCTGAGAGGTGCTGTTTCTGCGACTGAAGATGGATTTCTGACTTTTGTTCGAAGGACTTATGGTATAAAGCCATTGATGGCAGCGATCGGTTCCTGTTGTCTGGTTGGTGTTATTTGGAAAGGGACATTATATGTCGCCAATCTTGGAGACTCTCGTGCTGTAATTGGTTCTGTAGATAGATCTAATAAGATCGTTGCTGAGCAGTTGACCAGAGAGCACAATGCTAGCAAAGAGGAGGTTCGACGTGAACTCAAGTCCTTGCATCCTGAAGATTCTCAGATTGTAGTCATGAAGCATGGAACTTGGCGCATTAAGGGCATCATCCAGGTTTTCTCTTCTTTTCGGAAGGACTTCTTAATGGTTCTTATTCGTTATGTTTCCATTTGTTACTTGCAGGTTTTGAAGATTAAATATGACTGGGAATATCTAATCTGA 777 0.4582 MFSWLARIVSACLRPVRRYARMNKDDVDDPSSNDDSLLWYKDLEKHSCGEFSYAVVQANEIIEDHSQVETGSDAMFIGVYDGHGGPEASRFISDHLFHHLMRIARDNGTISEDILRGAVSATEDGFLTFVRRTYGIKPLMAAIGSCCLVGVIWKGTLYVANLGDSRAVIGSVDRSNKIVAEQLTREHNASKEEVRRELKSLHPEDSQIVVMKHGTWRIKGIIQVFSSFRKDFLMVLIRYVSICYLQVLKIKYDWEYLI 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g0891 258 ProSitePatterns PPM-type phosphatase domain signature. 76 84 IPR000222 GO:0043169
Lele16g0891 258 ProSiteProfiles PPM-type phosphatase domain profile. 47 258 IPR001932 -
Lele16g0891 258 PANTHER PROTEIN PHOSPHATASE 36 241 - -
Lele16g0891 258 Gene3D - 21 235 IPR036457 -
Lele16g0891 258 SUPERFAMILY PP2C-like 53 228 IPR036457 -
Lele16g0891 258 Coils Coil 180 200 - -
Lele16g0891 258 SMART PP2C_4 44 245 IPR001932 -
Lele16g0891 258 CDD PP2Cc 51 258 IPR001932 -
Lele16g0891 258 Pfam Protein phosphatase 2C 67 223 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g0891 Lele-ChrLele16 5021319 5022680 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g0891 1 233 PP2C-type Phosphatase Gene Family AT5G06750 68.724 5.20e-114 331