Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g0890 ATGGTATCTAGATCTATAGGTGATGCATATTTGAAAAGACCAGAGTTTTCTCTTGATCCTTCATTCCCAAAATTCCACCTACCGGAACCTATCCGGCGTCCTGTGCTGACAGCCGAGCCATCTATATGTTCAAGGGTCCTACAACCTAATGATAAATTCCTAATATTTGCATCTGATGGACTTTGGGAACACTTGACAAATCAGGAAGCTGCAGAGATCGTGCATAACAACCCCCGAACGGGGATAGGGAGAAGACTGCTTAAAGCCGCTCTGAACGAGGCGGCTAGGAAACGAGAAATGAGGTATAAAGATCTGCAGAAGGTTGAGAAAGGGATCAGGAGGTTCTTTCATGATGATATAACGGTTGTGGTTGTCTTCATCGACCACGAGATGGTTGGGAAGAATATTGCAGTACCAGAATTGTCCATCAGAGGCTTCACTGACACGGTTGGTCCGTCCAATTTTAAGGTCGTCCGGGATTGA 483 0.4555 MVSRSIGDAYLKRPEFSLDPSFPKFHLPEPIRRPVLTAEPSICSRVLQPNDKFLIFASDGLWEHLTNQEAAEIVHNNPRTGIGRRLLKAALNEAARKREMRYKDLQKVEKGIRRFFHDDITVVVVFIDHEMVGKNIAVPELSIRGFTDTVGPSNFKVVRD 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g0890 160 PANTHER PROTEIN PHOSPHATASE 2 125 - -
Lele16g0890 160 CDD PP2Cc 2 127 IPR001932 -
Lele16g0890 160 Pfam Protein phosphatase 2C 2 81 IPR001932 -
Lele16g0890 160 ProSiteProfiles PPM-type phosphatase domain profile. 1 127 IPR001932 -
Lele16g0890 160 SUPERFAMILY PP2C-like 2 128 IPR036457 -
Lele16g0890 160 Gene3D - 1 136 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g0890 Lele-ChrLele16 5020476 5021279 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g0890 2 157 PP2C-type Phosphatase Gene Family AT5G06750 68.153 1.08e-75 229