Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g0886 ATGAATGGAAGTTCAGATATGAAGATTCTGCTAATTTCTCCACCTCTCAATCTATCTTCATATCTACCAGAAGAGATTTTATTGGGTTTCTCAGCTTCAACAAGTAATTATACAGAGCTGAATTGTGTAAGAGCTTGGGGATTCCACGGCACTCGAATTGCGGATGATGATCCACAACTGTTGTGGGTTTGGATAACAGTTCCTGCAGCGCTGGTCATCTTAGGTGGGGTGATCTTTTTCTTGCTCTGGCAAAGGAAACGCTGTATGGAGATGTCAGATGAAGCGTACCCGAGAAAAGAGGATCATATTCAACATAGCTCTATGGCCCCGAAGAAATTCCGACTAGGAGAGATAAAAAAAGCAACAGACAAATTCAGTCCTCAAAACATGCTTGGGGAAGGAACACCTGGCTACATGCCTCCAGAAACATTCCTTACAGGGAAGGCAACGGTGGAGACAGATGTGTATGCATTTGGCATTGTTGTATTAGAAGTTGTGTGCGGAATGAGACGAAGGAATATGGATTCCCAAGAGGACGAGTATAAGAATAACATTGTGCATTGGGTGTGGGAGCTTTACGGGAAGGGAAAATTATTAGCTGCAGTTGATAGTAGAATCATTGAGGAAATAGAAGAGGAAAAGGTGCAAGACGCCCTTGTTCTGTGTTTGGCGTGTTGTCATCCAAACCCACACCAAAGGCCTTCCATGAGGACTGTGATGCAGGTTCTTACAGGGGAATTAGCTCCACCAGAAGTACCCAAGCAAAGACCTGCTTTTGTGTGGCCTGCCTTACCCTTGACGGGAATACCTCTACCACAGGAAGTCAACTCGCTCCCATCTTAG 843 0.4484 MNGSSDMKILLISPPLNLSSYLPEEILLGFSASTSNYTELNCVRAWGFHGTRIADDDPQLLWVWITVPAALVILGGVIFFLLWQRKRCMEMSDEAYPRKEDHIQHSSMAPKKFRLGEIKKATDKFSPQNMLGEGTPGYMPPETFLTGKATVETDVYAFGIVVLEVVCGMRRRNMDSQEDEYKNNIVHWVWELYGKGKLLAAVDSRIIEEIEEEKVQDALVLCLACCHPNPHQRPSMRTVMQVLTGELAPPEVPKQRPAFVWPALPLTGIPLPQEVNSLPS 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g0886 280 Pfam Protein kinase domain 132 241 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele16g0886 280 Gene3D Transferase(Phosphotransferase) domain 1 82 262 - -
Lele16g0886 280 Pfam Legume lectin domain 7 56 IPR001220 GO:0030246
Lele16g0886 280 Gene3D - 1 51 - -
Lele16g0886 280 SUPERFAMILY Protein kinase-like (PK-like) 132 262 IPR011009 -
Lele16g0886 280 SUPERFAMILY Concanavalin A-like lectins/glucanases 6 61 IPR013320 -
Lele16g0886 280 PANTHER - 13 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g0886 Lele-ChrLele16 5003933 5005235 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g0886 73 257 Receptor kinase-like Gene Family AT3G53380 38.095 1.66e-33 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Lele16g0886 Pkinase 3.7e-10 CL0016