Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g0874 ATGAGTTGCTGCGGAGGAGCGGAGGAAGAGATCGCAGGCCCGCCTCCAAACCAATCCACGTCACCACCTGGAGGGGCTAACGCATATGGTGGCGGAGAGAGAGGAGAACCAAGGGGAAATGCTGCCAAGACAGGCGGTCCACAGGCAGATTTATCATCAATTGAGACACCAGCTATTTCATTGGAGGAGTTAAATAGTATCACTGACAACTTTGGTTCCGATGCTTTGATTGGAGAAGGTTCCTATGGACGGGTTTTCTACGCAAAGTTGAGCGATGGTCAGGAAGCAGCCATAAAAAAGCTGGATAACAGTTCTTCAACTGAACCAGACTCTGATTTTACAGCACAGTTATCAATAGTCTCAATACTCAAGCACGAGCATTTTTTGGAGTTGATGGGATATTGTCTCGAGGGATCCAACAGAATTTTGGTTTATCAGTATGCAAGCAAGGGCTCTCTTCATGATATATTACATGGAAGGAAAGTAGTGAAAAAGTATGCCATGACTGGGCAGATTACCCAGAAAAGTGATGTCTACAGTTTTGGAGTGGTGCTCTTAGAACTCCTGACAGGAAGAAAGCCAGTAGACCACACAATGCCCAAGGGACAACAAAGTCTCGTAACGTGGGCAACTCCAAGGCTGAGTGAGGACAAAGTGAAACAGTGTGTGGATCCAAAGCTAAACAACGAATACCCACCCAAGGCCGTTGCAAAGTTGGCAGCCGTAGCAGCACTTTGTGTTCAGTATGAAGCTGACTTCCGGCCAAATATGACGATAGTGGTTAAAGCTCTTCAGCCACTTTTCAATTCAAAGCCGGCTGGCCCTGAATCTGGTGCTTGA 840 0.469 MSCCGGAEEEIAGPPPNQSTSPPGGANAYGGGERGEPRGNAAKTGGPQADLSSIETPAISLEELNSITDNFGSDALIGEGSYGRVFYAKLSDGQEAAIKKLDNSSSTEPDSDFTAQLSIVSILKHEHFLELMGYCLEGSNRILVYQYASKGSLHDILHGRKVVKKYAMTGQITQKSDVYSFGVVLLELLTGRKPVDHTMPKGQQSLVTWATPRLSEDKVKQCVDPKLNNEYPPKAVAKLAAVAALCVQYEADFRPNMTIVVKALQPLFNSKPAGPESGA 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g0874 279 Gene3D Transferase(Phosphotransferase) domain 1 149 273 - -
Lele16g0874 279 ProSiteProfiles Protein kinase domain profile. 71 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele16g0874 279 Gene3D Phosphorylase Kinase; domain 1 44 147 - -
Lele16g0874 279 Pfam Protein tyrosine and serine/threonine kinase 169 264 IPR001245 GO:0004672|GO:0006468
Lele16g0874 279 Pfam Protein tyrosine and serine/threonine kinase 76 160 IPR001245 GO:0004672|GO:0006468
Lele16g0874 279 SUPERFAMILY Protein kinase-like (PK-like) 57 265 IPR011009 -
Lele16g0874 279 ProSitePatterns Protein kinases ATP-binding region signature. 77 100 IPR017441 GO:0005524
Lele16g0874 279 MobiDBLite consensus disorder prediction 1 51 - -
Lele16g0874 279 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 165 271 - -
Lele16g0874 279 FunFam Pti1 kinase-like protein 47 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g0874 Lele-ChrLele16 4933856 4935671 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g0874 162 278 Receptor kinase-like Gene Family AT3G58690 53.782 4.13e-33 123
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIII Lele16g0874 PK_Tyr_Ser-Thr 1.2e-09 CL0016