Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g0870 ATGCCAGCAGGTCATGGGTTGAGATCTCGTACCCGAGACTCGTTCTCTCGGCCATTCAGGAAGAAGGGTACCATCGCCCTCACCACTTACCTTCGCACCTACAAGATTGGTGACTACGTCGACATCAAGGTCAATGGCGCTGTCCACAAAGGTATGCCTCATAAGTTCTACCACGGTCGTACCGGCCGTGTCTGGAACATCACCAAGCGCGCTATCGGCGTCGTGGTGAACAAACAGGTTGGCAACAGGATAATCAGGAAGAGAATCCATGTGCGTGTTGAGCACGTGATGCCTTCAAGGTGCACAGAGGAGTTCCGTCAGAGGAAAATTAAGAATGATGAATTGAAGGCAGAGGCAAAGGCCAAGGGAGAGGTCATCAGCACTAAGAGGCAGCCTAAGGGCCCTAAGCCAGCAGCAAACATTGGAGAGCCCATATCTTGGTATTCGGATGTTTCAGTGTTCAAGGAATCTTATGTCAACACTCTAGCGATACTAGTCCGAAGATTTCACTCCATTTCATTTTCAGACGAGGCCTTTCATTGCTCAATTATTAGATGA 558 0.4928 MPAGHGLRSRTRDSFSRPFRKKGTIALTTYLRTYKIGDYVDIKVNGAVHKGMPHKFYHGRTGRVWNITKRAIGVVVNKQVGNRIIRKRIHVRVEHVMPSRCTEEFRQRKIKNDELKAEAKAKGEVISTKRQPKGPKPAANIGEPISWYSDVSVFKESYVNTLAILVRRFHSISFSDEAFHCSIIR 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g0870 185 PANTHER 60S RIBOSOMAL PROTEIN L21 1 141 IPR001147 GO:0003735|GO:0005840|GO:0006412
Lele16g0870 185 Gene3D Ribosomal protein L21 1 97 IPR036948 GO:0003735|GO:0005840|GO:0006412
Lele16g0870 185 SUPERFAMILY Translation proteins SH3-like domain 3 99 IPR008991 -
Lele16g0870 185 FunFam 60S ribosomal protein L21 99 141 - -
Lele16g0870 185 Pfam Ribosomal protein L21e 1 101 IPR001147 GO:0003735|GO:0005840|GO:0006412
Lele16g0870 185 Gene3D - 99 146 - -
Lele16g0870 185 FunFam 60S ribosomal protein L21 1 98 - -
Lele16g0870 185 ProSitePatterns Ribosomal protein L21e signature. 37 62 IPR018259 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g0870 Lele-ChrLele16 4901851 4903623 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g0870 1 138 Cytoplasmic Ribosomal Protein Gene Family AT1G09690 81.159 1.61e-83 242