Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g0868 ATGCTGACCGTGGTTCGCGTACACCTCCCCTCTGATATACCCATTATAGGCTGTGAGCTCACGCCGTACGTGCTCATACAGCGACCAGACAAGCATGTTGTTACCCACGACGATGTCCCTGAGACGGCCCCAATAGATGGCCATTTCTTGCGGTATAGGTGGTATCGTGTACAAAGTGATAAAAAGGTTGCTGTCTGTAGCATACATCCATCTGAGCAGGCTACGCTGCAGTGCCTTGGCTGTGTTAAGGCCAAAATACCTGTTACCAAAAGTTATCATTGCACACCAAAGTGTTTTTCAGATGCATGGCAGCATCATCGTCTTTTACATGATCGTGCTGCAAGTGCGGTCAATGAAAATGGAACTGAAGAGGAGGAACTATTTGGACGCTATAATAGCTCTGGCTCTGGGGCAGTTAATAACAGTTTATCTAGCTCTGCTTCAAGCGCTAGCTTGGCAAATGTGTCAGCTCCTTTGTATCCAGCTGCTGTTACACAACGAAGTGGTGGTGAAACTTGGATTGAAGTTGGACGATATAAAACGTATACCCCAACAGCTGATGATGTTGGTCATGTCCTTAAATTTGAGTGTGTTGTAGTTGATGCAGAGGCAAAAGCTCCTGTAGGGCATGTGAATACTCTACTAACTTCTCGTGTTATTCCTGCTCCCTCTCCTATTCCACGACGTTTGATTCCTGTTGATGGGATGGCACATATAGATGCAGATGTTCGCATAACATCTTCAGGAACATTCACTGTTCTATCTTACAACATTTTGTCTGATGCATATGCTTCAAATGAATTATATGGTTACTGTCCTCCGTGGGCACTTTCTTGGCCTTACCGCAGGCAAAATTTGTTAAGAGAAATAGTTGATTACCGGGCAGATATTATTTGTCTTCAGGAGGTACAAAGTGATCATTATGAGGATTTTTTTGCTCCTGAACTGGACAAACATGGTTATTATGGTCTATACAAGAGAAAAACCAATGAGGCATTTGGCAGCAACACCAACACAGTTGATGGTTGTGCAACCTTTTTCCGTAGAGACAGATTTTCGCATGTGAAGAAATATGAGGTTGAATTTAACAAGGCTGCGCAGTCTTTAACAGATGCTATGATTCCAACTGGACAGAAGAAAGCTGCCTTAAATCGGCTGGTTAAGGACAACATTGCACTAATTGTGGTTCTAGAAGCAAAAGTTAACAATCAGCTAGTTGACAATCCTGGAAAAAGACAGCTTCTTTGTGTGGCCAATACACATGTAAATGTGCAACAAGATTTAAAAGATGTTAAACTCTGGCAGGTGCACACGCTCTTAAAAGGGTTGGAGAAAATTGCTGCAAGTGCAGATATTCCAATGTTGGTTTGTGGAGATTTTAATTCAGTTCCTGGAAGTGCTCCACATTCACTTCTTGCATTGGGGAAGGTTGATCAAACCCATCCAGATTTAGCAGTTGATCCACTTAATATACTGCGGCCACACAACAAGTTGGTTCATCAATTGCCTCTGGTTAGTGCATACTCATCCTTTGGAAGAACCGTGGGTCTTGGATTTGAGCAGCACAGAAGGAGAGTGGATAGTGCAACAAATGAACCCTTATTCACAAATGTCACCAGGGATTTTATTGGCACTCTAGATTACATATTCTACACTGCGGATTCATTGGTGGTGGAGTCACTATTGGAGCTATTGGATGAGGAGAGTTTGAGGAAAGACACAGCACTTCCCTCTCCTGAATGGTCGTCTGATCATATAGCTCTGTTAGCTGAATTTCGCTGCTGCAAGAATAGATCTAGGCGTTAA 1806 0.4308 MLTVVRVHLPSDIPIIGCELTPYVLIQRPDKHVVTHDDVPETAPIDGHFLRYRWYRVQSDKKVAVCSIHPSEQATLQCLGCVKAKIPVTKSYHCTPKCFSDAWQHHRLLHDRAASAVNENGTEEEELFGRYNSSGSGAVNNSLSSSASSASLANVSAPLYPAAVTQRSGGETWIEVGRYKTYTPTADDVGHVLKFECVVVDAEAKAPVGHVNTLLTSRVIPAPSPIPRRLIPVDGMAHIDADVRITSSGTFTVLSYNILSDAYASNELYGYCPPWALSWPYRRQNLLREIVDYRADIICLQEVQSDHYEDFFAPELDKHGYYGLYKRKTNEAFGSNTNTVDGCATFFRRDRFSHVKKYEVEFNKAAQSLTDAMIPTGQKKAALNRLVKDNIALIVVLEAKVNNQLVDNPGKRQLLCVANTHVNVQQDLKDVKLWQVHTLLKGLEKIAASADIPMLVCGDFNSVPGSAPHSLLALGKVDQTHPDLAVDPLNILRPHNKLVHQLPLVSAYSSFGRTVGLGFEQHRRRVDSATNEPLFTNVTRDFIGTLDYIFYTADSLVVESLLELLDEESLRKDTALPSPEWSSDHIALLAEFRCCKNRSRR 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g0868 601 PANTHER CARBON CATABOLITE REPRESSOR PROTEIN 4 162 594 - -
Lele16g0868 601 CDD Deadenylase_CCR4 253 594 - -
Lele16g0868 601 Gene3D Endonuclease/exonuclease/phosphatase 223 600 IPR036691 -
Lele16g0868 601 SUPERFAMILY DNase I-like 246 595 IPR036691 -
Lele16g0868 601 FunFam Carbon catabolite repressor protein 4 1 220 599 - -
Lele16g0868 601 Pfam Endonuclease/Exonuclease/phosphatase family 254 585 IPR005135 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g0868 Lele-ChrLele16 4892466 4897276 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g0822 06 5082805 5083793 Lele16g0868 16 4892466 4897276 CCT
Lele07g0996 07 5998847 6000685 Lele16g0868 16 4892466 4897276 CCT
Lele08g0810 08 5093420 5094700 Lele16g0868 16 4892466 4897276 CCT
Lele05g0954 05 5910894 5915187 Lele16g0868 16 4892466 4897276 CCT
Lele13g1575 13 24806679 24819472 Lele16g0868 16 4892466 4897276 hybridization
Lele14g1497 14 23176576 23182320 Lele16g0868 16 4892466 4897276 hybridization