Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g0867 ATGGAAAAAGCAATTCGCTTATTACTTCACGCCCCACCTCCAGTCTGCATTTCCTCTTTCTTTTTCGTTCCTTTTCACTCCGCATGCTGCAAGCAGCTGGAGAAGGACGCTGGGAAATTTTCATCTTGGGTTTGTCCTAATCCGGATATTGCTCCCACGGTCCTGATTGAGCAACGTAGCAAGATGGGTGTGAATTCCCTGCCATCGGAGTCGAGTAACGATCTCGATGAGCAGATCTCGCAGCTAATGCAGTGCAAGCCGCTTTCAGAGCAACAGGTTAGAGTTTTATGCGAGAAGGCAAAGGAGATTTTGATGGATGAAAGTAATGTCCAGCCTGTGAAAAGTCCTGTGACAATCTGTGGTGATATTCATGGACAGTTTCATGATCTAGCGGAGCTATTTCGAATTGGAGGAAAGTGTCCAGATACAAACTACTTGTTCATGGGAGATTATGTGGACCGAGGTTATTATTCAGTTGAAACTGTAACACTTCTTGTGTCTTTGAAAGTGCGGTATCCTCAACGGATTACTATTCTTCGAGGAAACCATGAAAGCCGTCAGATTACTCAAGTTTATGGGTTTTATGATGAATGCCTAAGAAAATATGGTAATGCCAATGTTTGGAAGATCTTTACAGACCTTTTTGATTACTTTCCATTGACTGCATTGGTTGAATCAGAAATATTTTGTTTGCATGGTGGACTGTCCCCATCTATTGAAACCCTTGATAATATAAGGAACTTTGATCGAGTTCAAGAGGTTCCTCATGAAGGGCCCATGTGTGATCTGTTATGGTCCGACCCAGATGACAGATGTGGCTGGGGGATTTCCCCTCGTGGTGCTGGATATACCTTTGGCCAGGATATATCTGAGCAATTCAATCACACAAACAGTCTTAAGTTGATCGCTAGAGCTCACCAGCTAGTGATGGATGGATTTAACTGGGCTCATGAACAAAAGGTGGTTACCATATTTAGTGCACCTAACTACTGTTATAGATGTGGGAACATGGCTTCCATTTTGGAGGTTGATGATTGCAAGAGCCACACATTTATTCAGTTTGAACCAGCTCCTAGGAGAGGTGAACCGGATGTCACCCGTAGGACGCCTGATTACTTCCTATAA 1125 0.4356 MEKAIRLLLHAPPPVCISSFFFVPFHSACCKQLEKDAGKFSSWVCPNPDIAPTVLIEQRSKMGVNSLPSESSNDLDEQISQLMQCKPLSEQQVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANVWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHTNSLKLIARAHQLVMDGFNWAHEQKVVTIFSAPNYCYRCGNMASILEVDDCKSHTFIQFEPAPRRGEPDVTRRTPDYFL 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g0867 374 PRINTS Serine/threonine phosphatase family signature 320 336 IPR006186 GO:0016787
Lele16g0867 374 PRINTS Serine/threonine phosphatase family signature 116 143 IPR006186 GO:0016787
Lele16g0867 374 PRINTS Serine/threonine phosphatase family signature 242 269 IPR006186 GO:0016787
Lele16g0867 374 PRINTS Serine/threonine phosphatase family signature 213 239 IPR006186 GO:0016787
Lele16g0867 374 PRINTS Serine/threonine phosphatase family signature 298 318 IPR006186 GO:0016787
Lele16g0867 374 PRINTS Serine/threonine phosphatase family signature 145 172 IPR006186 GO:0016787
Lele16g0867 374 PRINTS Serine/threonine phosphatase family signature 178 202 IPR006186 GO:0016787
Lele16g0867 374 Pfam Calcineurin-like phosphoesterase 116 307 IPR004843 GO:0016787
Lele16g0867 374 Gene3D - 68 374 IPR029052 -
Lele16g0867 374 CDD MPP_PP2A_PP4_PP6 74 358 - -
Lele16g0867 374 ProSitePatterns Serine/threonine specific protein phosphatases signature. 179 184 IPR006186 GO:0016787
Lele16g0867 374 FunFam Serine/threonine-protein phosphatase 68 374 - -
Lele16g0867 374 SUPERFAMILY Metallo-dependent phosphatases 70 359 IPR029052 -
Lele16g0867 374 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A-RELATED 73 374 - -
Lele16g0867 374 SMART pp2a_7 88 358 IPR006186 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g0867 Lele-ChrLele16 4884900 4890794 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g0867 80 304 Calmodulin-binding Proteins AT5G63870 34.831 8.92e-33 122