Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g0857 ATGGCAGCTGCGGTGGCAATTCCTCCTGAAGCTACCACGAGTATAGACCCGACACAGATCGAGGTGAAGCTCTTTAACAGGTGGACCTTCGATGACGTTCAGGTTAATGATATCTCTTTGGCTGATTATATTGGAGTGGCAGCATCCAAGCATGCAACATATGTTCCTCACACTGCTGGTAGGTACTCAGTCAAGCGATTCAGGAAAGCACAGTGTCCAATAGTTGAGAGGCTTACTAATTCTCTCATGATGCATGGTAGAAACAATGGGAAGAAACTAATGGCAGTGAGGATTATTAAACATGCCATGGAAATTATCCACCTTCTGACTGATCAGAATCCTATTCAAGTTATTGTTGATGCTGTGATTAACAGTGGTCCTCGTGAAGATGCAACTCGAATTGGATCTGCTGGTGTCGTGAGGAGACAGGCTGTGGATATCTCACCCCTTCGCCGTGTTAATCAGGCCATCTATCTTCTAACTACCGGCGCTCGTGAATCTGCATTTAGAAATATAAAGACCATTGCTGAATGCTTGGCTGATGAACTTATCAATGCAGCGAAGGGGTCATCCAACAGCTATGCAATCAAGAAAAAAGATGAGATTGAAAGAGTTGCGAAGGCAAATCGTTAA 633 0.4423 MAAAVAIPPEATTSIDPTQIEVKLFNRWTFDDVQVNDISLADYIGVAASKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g0857 210 FunFam 40S ribosomal protein S5 6 210 - -
Lele16g0857 210 PANTHER RIBOSOMAL PROTEIN S7 4 210 IPR000235 GO:0006412
Lele16g0857 210 Pfam Ribosomal protein S7p/S5e 64 210 IPR023798 -
Lele16g0857 210 TIGRFAM uS7_euk_arch: ribosomal protein uS7 21 210 IPR005716 GO:0003735|GO:0006412|GO:0015935
Lele16g0857 210 SUPERFAMILY Ribosomal protein S7 23 210 IPR036823 -
Lele16g0857 210 PIRSF RPS7p_RPS7a_RPS5e_RPS7o 1 210 IPR000235 GO:0006412
Lele16g0857 210 Gene3D Ribosomal protein S7 domain 5 210 IPR036823 -
Lele16g0857 210 CDD uS7_Eukaryote 23 210 IPR005716 GO:0003735|GO:0006412|GO:0015935
Lele16g0857 210 ProSitePatterns Ribosomal protein S7 signature. 76 102 IPR020606 GO:0003723|GO:0003735|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g0857 Lele-ChrLele16 4804271 4807408 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g0857 1 210 Cytoplasmic Ribosomal Protein Gene Family AT2G37270 85.714 1.30e-133 372
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele14g1510 14 23264391 23269295 Lele16g0857 16 4804271 4807408 hybridization