Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g0852 ATGGGTTCTCTTCCTCACGTTGTAGAGGATTGCCTAGGTTTTCTCCAACTCTACAGTGACGGCTCCATTTTCCGATCCGATGACATGGATTTCAATGTTTCACTCGTAGAAGACAACTCTGTACTCTTCAAAGACTGTCTCTTCCACAAAAGATTCAATCTTTTTCTCCGTCTCTTCAAACCCAAATCCTCCTCCTGCCGCAAGCTTCCTCTCATAATGTTCATCCACGGTGGAGGATTCTGCTTCGGCTCGCGAGCCTGGCCCCATCTTCACAATTGTTGCGTTCGCATGGCTTCGGCGCTTCAGGCAGTCGTGGTGGCGCCTGACTACCGTCTCGCACCGGAACACCGGCTTCCGGCCGCAGTGGACGATGCGGTGGAGGCCGTGAGGTGGGTGCAGAGGCAGGCTTTGAGTAATAAGGACGTGGTGGATGGCTGTGGAGATGCATGGTTGATGAATGGGGACGTTGACTTTGACCGAATGTTTATAGTGGGTGACTCATCTGGCGGGAACATCGCACACCATTTGGCGGTTCAACTGGGATCCGGATCCCGCGAAATGGATCCGGTTCGGGTACGAGGTTACGTGCTGTTGGCCCCCTTTTTCGGTGGGGAAGTTAGAGCCAAGTCCGAGGAGAGTGCTCGGGAAAAAATGTTGAGCTTGGATTTACTAGACAGCTTTTGGAGACTGTCAGTTCCTGTAGGAGAGAATAGAGACTACCCAATGGCGAACCCATTCGGACCTGCAAGTCCAAAGCTTGAACGAGTGATGCTTGATCCTATAATGGTAATTGTTGGAAGCAATGAATTACTGAAGGATAGAGCACAAGATTATGCAAGAAGATTGAAGGAACTAGGGAAAAAGATTGAGTACATTGAGTTTGAAGGAAGAGAACATGGGTTTTTCACTCAAGATCCTTTCTCACAAGTTGCAGGAGACGTCATGCAAATCCTCAAACGATTCTTGCTTGAAAATTCTAGTTAG 984 0.4909 MGSLPHVVEDCLGFLQLYSDGSIFRSDDMDFNVSLVEDNSVLFKDCLFHKRFNLFLRLFKPKSSSCRKLPLIMFIHGGGFCFGSRAWPHLHNCCVRMASALQAVVVAPDYRLAPEHRLPAAVDDAVEAVRWVQRQALSNKDVVDGCGDAWLMNGDVDFDRMFIVGDSSGGNIAHHLAVQLGSGSREMDPVRVRGYVLLAPFFGGEVRAKSEESAREKMLSLDLLDSFWRLSVPVGENRDYPMANPFGPASPKLERVMLDPIMVIVGSNELLKDRAQDYARRLKELGKKIEYIEFEGREHGFFTQDPFSQVAGDVMQILKRFLLENSS 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g0852 327 Pfam alpha/beta hydrolase fold 72 302 IPR013094 GO:0016787
Lele16g0852 327 Gene3D alpha/beta hydrolase 16 323 IPR029058 -
Lele16g0852 327 SUPERFAMILY alpha/beta-Hydrolases 5 322 IPR029058 -
Lele16g0852 327 Coils Coil 268 288 - -
Lele16g0852 327 PANTHER ARYLACETAMIDE DEACETYLASE 12 302 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g0852 Lele-ChrLele16 4778886 4780883 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g0852 7 305 Carbohydrate Esterase AT5G16080 32.792 1.64e-53 177
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g0839 06 5207579 5210763 Lele16g0852 16 4778886 4780883 CCT
Lele07g1019 07 6123276 6125530 Lele16g0852 16 4778886 4780883 CCT
Lele08g0828 08 5219802 5223015 Lele16g0852 16 4778886 4780883 CCT
Lele05g1529 05 9811365 9813027 Lele16g0852 16 4778886 4780883 CCT
Lele13g1584 13 24894332 24896222 Lele16g0852 16 4778886 4780883 hybridization
Lele14g1515 14 23291836 23293885 Lele16g0852 16 4778886 4780883 hybridization