Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g0846 ATGGGCAACGTCTGTGTGGGACCTAGCCTGGGTGGGAATGGGTTCTTCCAATCGATCACATCCGCTTTCAAGAAAACCCCGCCGCCGGAGGGCAGGCTTCCGGCGCCTAACGGCGACAAGGACAATAAAAGCACGGAAAATGCTGGGCCTGATTCATCTAAAGATTCTGACGCTCCAAAGCAAGTTCAAATTACACCACCTGAATTGGTGAAAATTCCCAGTGATGAAAAGCTGCCGCCACCAGAACCCGAAAAGCCTGCTATACCTGAGGTCAATGAACCTACCGGTAGTACTTCTGGTGCAGGGAAAGATGAGAAGCCTGCTAAGCCGGAGGTTGTCAATGATGAGAAGCCCGCTAAGCCGGAGGTTGTCAATGAAGAGAAGTCCGCTAAGCCGGAGGTGGTCAATGATGAGAAGCCCGCTACGACGGAGGTGGTTATCAATGAAGAGAAGCCTGCTAGGCCGGAGGTGGTGGTCAATGACCCTGCTCCTAAGGAACCTGAAAAGCCTGTTAAGCCGGAGGTGGTCAACGAAGCTTCCTCTAACAATACCGCTAATGCTGGTGAAGCTACGAAACCTACTCATGTTAAAAGGGCATCGAGCCTGGGACTTCGAATAGATTCGGTGTTGGGGAAGAAAAATGAAAATATTAAGGATTTTTATAGTCTGGGACGGAAGCTTGGACAAGGGCAGTTTGGGACAACATACTACTGTCTGGAAAAGACCACTGGCAGAGAGTTTGCTTGTAAATCCATTCTTAAGAGAAAATTGAACACACAAGAGGATATAGAAGATGTAAGAAGGGAAATTCAGATAATGCACCACTTGTCTGGTCATCCCAATGTGATTCGGATAATTGGTGCTTATGAGGATGCTGTAGCTGTTCATGTCGTTATGGAACTCTGTGCTGGTGGAGAGCTTTTTGACAGGATCATACAGAGAGGGCACTACACTGAGAAAAAGGCCGCCGAACTTGGAAGGGTAATTGTTGGTGTCGTAGAGGCATTCCATTCTATGGGGGTCATGCATCGAGACTTGAAGCCAGAGAACTTTCTCTTCGTCGGCCAAGAGGAAGAGTCACAGCTTAAGACAATAGATTTCGGGCTCTCGGTGTTCTTTAGACCAGGTGAAACATTTACCGATGTGGTTGGGAGCCCCTATTACGTGGCCCCTGAAGTTTTGCGGAAACTTTATGGTAAAGAATGTGACGTCTGGAGTGCAGGGGTGATCATTTATATCTTACTGAGTGGAGTTCCCCCATTTTGGGACGAAACGGAGCTAGGCATATTTGACCAAGTTTTAAAAGGAGAACTTGACCTTGTCTCTGAGCCATGGCCTAGCATATCTGCAAGTGCAAAGGATCTTCTTCGAAGAATGCTTGTAAGAGATCCTAAGAAGCGACTATCGGCACGTGAAGTTCTTAGCCATCCTTGGTTCCAGACCGAAGGTTTTGCTCTTGATAAACCTCTTGATTCTGTTGTTTTGACTCGTTTGAAGCAATTTTCTGCCAGGAACAAGTTCAAAAAGATGGCGATCCGAGTAATTGCTGAAAGTCTGTCGGAGGATGAAATTGCTGGGTTGAAAGAAATGTTCAAGACGATAGACACGGATAATAGTGGACACATCACTCGTGAGGAACTGAAAGTTGGTTTGGAGAGAGTGGGTGCTTTCCTCAAGGATTCTGAAATTGATCGGTTAATGCAATCGGCTGACACGGATAACAGCGGCACATTAGACTATGGTGAATTCATAACAGCCATGATTCATGAAAACAAGGTCCAACAGGAGGATCGTCTGTATGCCGCCTTCTCCTATTTTGACAAAGATAATAGCGGCTACATTACGCGAGATGAGCTCCAGCAAGCGTGTCAAAAGTTTGGTCTGGAAGATGTTCAATTAGATGATATAATCCGCGAAGTTGACCGGGATAATGATGGGCGCATTGATTATAACGAGTTTGTTGCAATGATGCAAGAATCTGAAAAGGGACTATGGAATAGCGTCAGTCGAGTTGCGGATGTCGTCGAGCATTAA 2034 0.4646 MGNVCVGPSLGGNGFFQSITSAFKKTPPPEGRLPAPNGDKDNKSTENAGPDSSKDSDAPKQVQITPPELVKIPSDEKLPPPEPEKPAIPEVNEPTGSTSGAGKDEKPAKPEVVNDEKPAKPEVVNEEKSAKPEVVNDEKPATTEVVINEEKPARPEVVVNDPAPKEPEKPVKPEVVNEASSNNTANAGEATKPTHVKRASSLGLRIDSVLGKKNENIKDFYSLGRKLGQGQFGTTYYCLEKTTGREFACKSILKRKLNTQEDIEDVRREIQIMHHLSGHPNVIRIIGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTEKKAAELGRVIVGVVEAFHSMGVMHRDLKPENFLFVGQEEESQLKTIDFGLSVFFRPGETFTDVVGSPYYVAPEVLRKLYGKECDVWSAGVIIYILLSGVPPFWDETELGIFDQVLKGELDLVSEPWPSISASAKDLLRRMLVRDPKKRLSAREVLSHPWFQTEGFALDKPLDSVVLTRLKQFSARNKFKKMAIRVIAESLSEDEIAGLKEMFKTIDTDNSGHITREELKVGLERVGAFLKDSEIDRLMQSADTDNSGTLDYGEFITAMIHENKVQQEDRLYAAFSYFDKDNSGYITRDELQQACQKFGLEDVQLDDIIREVDRDNDGRIDYNEFVAMMQESEKGLWNSVSRVADVVEH 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g0846 677 PANTHER SERINE/THREONINE-PROTEIN KINASE 212 653 - -
Lele16g0846 677 SMART serkin_6 221 479 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele16g0846 677 MobiDBLite consensus disorder prediction 36 50 - -
Lele16g0846 677 CDD STKc_CAMK 220 478 - -
Lele16g0846 677 Gene3D - 504 662 - -
Lele16g0846 677 MobiDBLite consensus disorder prediction 1 138 - -
Lele16g0846 677 MobiDBLite consensus disorder prediction 104 138 - -
Lele16g0846 677 ProSitePatterns EF-hand calcium-binding domain. 535 547 IPR018247 -
Lele16g0846 677 SUPERFAMILY EF-hand 519 658 IPR011992 -
Lele16g0846 677 ProSiteProfiles Protein kinase domain profile. 221 479 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele16g0846 677 Gene3D Transferase(Phosphotransferase) domain 1 307 503 - -
Lele16g0846 677 ProSiteProfiles EF-hand calcium-binding domain profile. 522 557 IPR002048 GO:0005509
Lele16g0846 677 ProSitePatterns Serine/Threonine protein kinases active-site signature. 341 353 IPR008271 GO:0004672|GO:0006468
Lele16g0846 677 ProSiteProfiles EF-hand calcium-binding domain profile. 594 629 IPR002048 GO:0005509
Lele16g0846 677 ProSitePatterns EF-hand calcium-binding domain. 571 583 IPR018247 -
Lele16g0846 677 SMART efh_1 562 590 IPR002048 GO:0005509
Lele16g0846 677 SMART efh_1 526 554 IPR002048 GO:0005509
Lele16g0846 677 SMART efh_1 598 626 IPR002048 GO:0005509
Lele16g0846 677 SMART efh_1 632 660 IPR002048 GO:0005509
Lele16g0846 677 ProSitePatterns EF-hand calcium-binding domain. 607 619 IPR018247 -
Lele16g0846 677 ProSitePatterns EF-hand calcium-binding domain. 641 653 IPR018247 -
Lele16g0846 677 Gene3D Phosphorylase Kinase; domain 1 223 306 - -
Lele16g0846 677 ProSiteProfiles EF-hand calcium-binding domain profile. 558 593 IPR002048 GO:0005509
Lele16g0846 677 Pfam EF-hand domain pair 527 587 IPR002048 GO:0005509
Lele16g0846 677 Pfam EF-hand domain pair 597 658 IPR002048 GO:0005509
Lele16g0846 677 FunFam Calcium-dependent protein kinase 1 487 661 - -
Lele16g0846 677 FunFam Calcium-dependent protein kinase 1 223 306 - -
Lele16g0846 677 ProSiteProfiles EF-hand calcium-binding domain profile. 632 663 IPR002048 GO:0005509
Lele16g0846 677 Pfam Protein kinase domain 221 479 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele16g0846 677 SUPERFAMILY Protein kinase-like (PK-like) 219 490 IPR011009 -
Lele16g0846 677 CDD EFh 601 658 IPR002048 GO:0005509
Lele16g0846 677 FunFam Calcium-dependent protein kinase SK5 307 491 - -
Lele16g0846 677 ProSitePatterns Protein kinases ATP-binding region signature. 227 254 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g0846 Lele-ChrLele16 4741800 4745423 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g0846 1 669 EF-hand Containing Proteins AT3G10660 61.087 0.0 811
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Lele16g0846 Pkinase 2.2e-72 CL0016