Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g0844 ATGCTTAGTTACCATCCTGGGATTCAATCTCCGAACTTCAATTCTCACAAGCTTCCGTTTTTTTCGAAACGCAAGACCCCATCATTTTTGGCGGGTGATTCTTTAAATGCTTCTCGCTCTGGAGGATTGCGGGTGTCCTCCAAATTGGCGCCAAATTTCGAACGAGCCACGGAGGTTGAAGGAGACGGGAAACTGGTGGATAGTAATAAAGAGTTCGATACGATTGTGATAGGGTCTGGGATTGGAGGATTAGTTGCAGCGACGCAGCTGGCAGTGAAGGGTGCGAAAGTTTTAGTTTTGGAGAAATACGTGATTCCTGGAGGAAGCTCCGGGTTTTACCAGAGGGATGGTTACACTTTTGATGTTGGCTCTTCTGTAATGTTTGGTTTCAGTGATAAGGGTAATCTCAATTTAATAACACAAGCATTGGCAGCAGTTGGTTGTCAGATGCAGGTGATACCGGATCCAACAACTGTTCATTTCCATCTACCCAATAACCTTTCTGTTCGAGTGCACAGAGAATATGATAAATTCATTGAAGAACTTGTTAGTTACTTTCCCCATGAAAAGGAGGGTATTATCAAGTTCTACGGTGAATGCTGGAAGATTTTCAATTCCCTTAATTCACTGGAACTGAAGTCACTCGAGGAGCCACTCTACCTTTTCGAACAATTTTTTCAGAAGCCGCTTGAATGCCTAACTCTAGCATATTATTTGCCCCAAAATGCTGGAGATGTTGCTCGAAAGTATATTCAGGATCCACAATTGTTGTCTTTCATCGATGCAGAGGTTCTCTGTGACAGACATTTTGGTGGAATTAACTACCCTGTTGGGGGTGTTGGTGGGATTGCAAAATCATTAGCAGAAGGTCTGTTTAAACAGGGTAGTGAGATACGTTACAAGGCAAACGTCACTAACATTATAGTAGGTGTGAGGCTTTCAGATGGCAAGACGTTCTTTGCCAAAACCATAATATCAAATGCTACTAGATGGGATACCTTTGGTTGGTTTAGTTCAAATTTTGATAAGACGTTGTCTATACTGATTGCCATCATTTTGTGCTTGAGATTGGAGGAGCCATATGGAAGTATATTCTTAAGTATACCGACTGTTCTTGATTCATCATTGGCTCCTGAGGGCCGGCATATCCTTCATATATTCACAACATCTTCCATAGAGGACTGGGAGGGAATCTCAAGAGCAGAATATGAGGCAAAGAAGCAGCTTGTAGCAGATCAAATCATAAGCAGACTAGAGAATACATTGTTTCCAGGTCTCGGATCATCCATTGATTTTATGGAGGTAGGGACACCGAAGACACACCGGAGATACCTGGCTCGTGACAAGGGAACCTATGGACCAATGCCACGCAGCATTCCAAAGGGGTTATTGGGAATGCCGTTTAATACCACAGGCGTAGATGGTCTTTACTGTGTTGGTGATAGCTGCTTCCCTGGACAAGGTGTTATTGCAGTTGCATTTTCAGGAGTTATGTGTGCTCACCGAGTGGCTGCGGATATTGGGCTGGAGAAGAAGTCAGCAGTGTGGGATGCCGTGCATCTTCGGTTGCTTGGTTGGTTAAGAACATTGGCATGA 1596 0.4373 MLSYHPGIQSPNFNSHKLPFFSKRKTPSFLAGDSLNASRSGGLRVSSKLAPNFERATEVEGDGKLVDSNKEFDTIVIGSGIGGLVAATQLAVKGAKVLVLEKYVIPGGSSGFYQRDGYTFDVGSSVMFGFSDKGNLNLITQALAAVGCQMQVIPDPTTVHFHLPNNLSVRVHREYDKFIEELVSYFPHEKEGIIKFYGECWKIFNSLNSLELKSLEEPLYLFEQFFQKPLECLTLAYYLPQNAGDVARKYIQDPQLLSFIDAEVLCDRHFGGINYPVGGVGGIAKSLAEGLFKQGSEIRYKANVTNIIVGVRLSDGKTFFAKTIISNATRWDTFGWFSSNFDKTLSILIAIILCLRLEEPYGSIFLSIPTVLDSSLAPEGRHILHIFTTSSIEDWEGISRAEYEAKKQLVADQIISRLENTLFPGLGSSIDFMEVGTPKTHRRYLARDKGTYGPMPRSIPKGLLGMPFNTTGVDGLYCVGDSCFPGQGVIAVAFSGVMCAHRVAADIGLEKKSAVWDAVHLRLLGWLRTLA 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g0844 531 Gene3D - 73 191 IPR036188 -
Lele16g0844 531 PRINTS Pyridine nucleotide disulphide reductase class-I signature 73 95 - -
Lele16g0844 531 PRINTS Pyridine nucleotide disulphide reductase class-I signature 274 299 - -
Lele16g0844 531 PANTHER - 264 337 IPR045892 GO:0016116
Lele16g0844 531 SUPERFAMILY FAD/NAD(P)-binding domain 70 506 IPR036188 -
Lele16g0844 531 Pfam Flavin containing amine oxidoreductase 81 326 IPR002937 GO:0016491
Lele16g0844 531 Gene3D - 247 350 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g0844 Lele-ChrLele16 4721565 4725338 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele16g0844 16 4721565 4725338 Lele05g0991 05 6115918 6119504 CCT
Lele16g0844 16 4721565 4725338 Lele06g0849 06 5266205 5270614 CCT
Lele16g0844 16 4721565 4725338 Lele07g1026 07 6169020 6179511 CCT
Lele16g0844 16 4721565 4725338 Lele08g0840 08 5279621 5284273 CCT
Lele13g1591 13 24942514 24947416 Lele16g0844 16 4721565 4725338 hybridization
Lele14g1525 14 23343920 23347862 Lele16g0844 16 4721565 4725338 hybridization