Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g0840 ATGGGAAACAAATGCGTCTGTTTTGGATCAAGAACTTCAAAGAAGAAAGAAGTTCCCCAGGTTTCTAGTTCAACTGGGTGTTGTACTTGTACTCAATTCCGAAATTTTATACTTTGTAAGAACCGCAAAGCAAATGCGAATGCAACACCAAGTACTAAGGAGCCAAATTCCTCAAACACTGTCGCTGACAAGCCTCCAGAGGTAGCCAAAATTGAAAGGGACGACCCAAAATCAGTACTTGAGGATGCCACCAAAAAGGACCAACAAGTCTCAGACTCTAAAAAACCTTCCGAACCCATAAGGCACGTGGAGGAGCCAAGGGTAGCAGAACCATCAACTTCAAGAACAACACATAAAGCAAAATCTACAGAACCAAAGAAGCCCTACAATGTGAAGAGGCAGGCAGCTGCAGGGCTTAAAGCAGAGGCTGTATTGCAAACAAGAACAGGAAATCTGAAGGAGTTCTACACTTTGGGAAGGAAGCTTGGGAACGGGCAATTTGGGACTACATTTCATTGTGTGGAGAAGGACACAGGGAAAGAGTACGCTTGCAAGTCAATAGCCAAGAGGAAATTGATAACAGAGGAAGATTTGGAGGATGTGAGGAGGGAGATTCGGATAATGCATCACTTGGCAGGTTGTCCCGATGTCATATCCATAAAAGGGGCTTACGAGGACGCCGTGGCTGTTCATGTTGTGATGGAGCTATGTGCAGGTGGTGAGTTGTTTGATAGGATTGTGCAGAGAGGGCATTACACTGAGAGAAAAGCAGCTCATATAGCCAGGACTGTAGTTGGTGTCATTGAAGCTTGTCACTCACTTGGAGTAATGCATCGCGATCTTAAGCCCGAGAATTTCCTCTTCATCAATGAGCAGGAAGATTCTCCCCTTAAGGCTATCGATTTTGGCTTGTCTGCTTTCTTCAAACCAGGGGACATATTTCTTGACGTGGTAGGAAGCCCATACTACGTTGCACCAGAAGTTCTAAAGAAGCGATATGGTCCAGAAGCTGATGTGTGGAGTGCTGGTGTGATCATATTCATTCTGTTAAGTGGGTTGCCTCCGTTTTGGGCTGAAACGGAGCAAGAGATATTTAAGGAGGTATTGCACGGTGAACTTGATTTCAACTCAAATCCCTGGCCTAGTATTTCTGAAAGTGCAAAGGACTTGGTCAGGAAGATGCTTGATAGAGATCCTAGCAAGAGATTGACAGCCCATGAAGTTCTTTGTCATCCTTGGATTCGAGTTGATGGAGCGGCTCCTGATAAGCCTCTAGACCCTGCAGTTCTGACTCGCCTGAAGCAGTTTTCTGCAATGAACAAGCTCAAAAAAATGGCTCTTAGAATTATTGCAAAGAACCTGTCCGAAGAAGAAATTGCAGGGTTGAAAGAAATGTTTAAGATGATAGACACAGACAATAGTGGTCAAATTACTTTTGAAGAACTCAAGGCTGGATTGAAAGCCTTTGGGGCTAACATCGATGAATCCGAGATTCACAATCTAATGCAAGCAGCAGACGTTGACAACAGTGGCACAATAGACTACTCGGAATTCATAGCAGCAACCTTGAATCTCAACAAAGCAGAGAAAGAAGACAACTTAGTGGCTGCTTTCCATCATTTTGACAAAGATGGAAGTGGCTACATCACTCTAGACGAGCTTCAACAAGTTTGTGAAGAACTTGGTGAGGATAATGTTCGCTTGGAGGAGATCATCCGTGAGGCTGATCAAGATAATGATGGCCGAATAGACTACAGTGAATTTGTGGCAATGATGCAGAGAGGCAATGCAGATATGATTAAGGAGGGTGGTTCAAAGTTCGTCTCACTTGGAGCTTTCTTCCCACGAATCTCTCCTCCATATCTCCAGCGAAAACTTCAGTTTCACCAACTCCTCCTTTCATCTTCATCTCTCTATCCCATTGGATTGCCACTTAAAACCCATCCCACCCCGCGCTTCCAATCAATCTTCCCCCATAATGCCGTCTTTGAATTTCTCAACTTACGCCTCCATCTCCATTCATTTCTGTTATTGATAAGTCAAGATTCAAGAACCCCAGTTTCTCAGCTGATCGTGCCCTAA 2082 0.4428 MGNKCVCFGSRTSKKKEVPQVSSSTGCCTCTQFRNFILCKNRKANANATPSTKEPNSSNTVADKPPEVAKIERDDPKSVLEDATKKDQQVSDSKKPSEPIRHVEEPRVAEPSTSRTTHKAKSTEPKKPYNVKRQAAAGLKAEAVLQTRTGNLKEFYTLGRKLGNGQFGTTFHCVEKDTGKEYACKSIAKRKLITEEDLEDVRREIRIMHHLAGCPDVISIKGAYEDAVAVHVVMELCAGGELFDRIVQRGHYTERKAAHIARTVVGVIEACHSLGVMHRDLKPENFLFINEQEDSPLKAIDFGLSAFFKPGDIFLDVVGSPYYVAPEVLKKRYGPEADVWSAGVIIFILLSGLPPFWAETEQEIFKEVLHGELDFNSNPWPSISESAKDLVRKMLDRDPSKRLTAHEVLCHPWIRVDGAAPDKPLDPAVLTRLKQFSAMNKLKKMALRIIAKNLSEEEIAGLKEMFKMIDTDNSGQITFEELKAGLKAFGANIDESEIHNLMQAADVDNSGTIDYSEFIAATLNLNKAEKEDNLVAAFHHFDKDGSGYITLDELQQVCEELGEDNVRLEEIIREADQDNDGRIDYSEFVAMMQRGNADMIKEGGSKFVSLGAFFPRISPPYLQRKLQFHQLLLSSSSLYPIGLPLKTHPTPRFQSIFPHNAVFEFLNLRLHLHSFLLLISQDSRTPVSQLIVP 693
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g0840 693 SMART serkin_6 156 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele16g0840 693 ProSiteProfiles EF-hand calcium-binding domain profile. 493 528 IPR002048 GO:0005509
Lele16g0840 693 Gene3D Transferase(Phosphotransferase) domain 1 242 420 - -
Lele16g0840 693 Pfam Protein kinase domain 156 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele16g0840 693 ProSitePatterns EF-hand calcium-binding domain. 506 518 IPR018247 -
Lele16g0840 693 Gene3D Phosphorylase Kinase; domain 1 158 241 - -
Lele16g0840 693 ProSitePatterns Serine/Threonine protein kinases active-site signature. 276 288 IPR008271 GO:0004672|GO:0006468
Lele16g0840 693 SMART efh_1 567 595 IPR002048 GO:0005509
Lele16g0840 693 SMART efh_1 497 525 IPR002048 GO:0005509
Lele16g0840 693 SMART efh_1 461 489 IPR002048 GO:0005509
Lele16g0840 693 SMART efh_1 533 561 IPR002048 GO:0005509
Lele16g0840 693 CDD EFh 534 593 IPR002048 GO:0005509
Lele16g0840 693 ProSitePatterns EF-hand calcium-binding domain. 542 554 IPR018247 -
Lele16g0840 693 MobiDBLite consensus disorder prediction 46 63 - -
Lele16g0840 693 PANTHER SERINE/THREONINE-PROTEIN KINASE 146 588 - -
Lele16g0840 693 ProSiteProfiles EF-hand calcium-binding domain profile. 567 598 IPR002048 GO:0005509
Lele16g0840 693 FunFam Calcium-dependent protein kinase 1 158 241 - -
Lele16g0840 693 MobiDBLite consensus disorder prediction 66 128 - -
Lele16g0840 693 ProSiteProfiles Protein kinase domain profile. 156 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele16g0840 693 Gene3D - 421 597 - -
Lele16g0840 693 FunFam Calcium-dependent protein kinase SK5 242 426 - -
Lele16g0840 693 SUPERFAMILY EF-hand 453 594 IPR011992 -
Lele16g0840 693 ProSitePatterns Protein kinases ATP-binding region signature. 162 189 IPR017441 GO:0005524
Lele16g0840 693 MobiDBLite consensus disorder prediction 46 129 - -
Lele16g0840 693 Pfam EF-hand domain pair 462 522 IPR002048 GO:0005509
Lele16g0840 693 Pfam EF-hand domain pair 534 593 IPR002048 GO:0005509
Lele16g0840 693 CDD EFh 462 521 IPR002048 GO:0005509
Lele16g0840 693 ProSiteProfiles EF-hand calcium-binding domain profile. 457 492 IPR002048 GO:0005509
Lele16g0840 693 FunFam Calcium-dependent protein kinase 1 422 596 - -
Lele16g0840 693 CDD STKc_CAMK 155 413 - -
Lele16g0840 693 ProSitePatterns EF-hand calcium-binding domain. 470 482 IPR018247 -
Lele16g0840 693 ProSiteProfiles EF-hand calcium-binding domain profile. 529 564 IPR002048 GO:0005509
Lele16g0840 693 Coils Coil 551 578 - -
Lele16g0840 693 ProSitePatterns EF-hand calcium-binding domain. 576 588 IPR018247 -
Lele16g0840 693 SUPERFAMILY Protein kinase-like (PK-like) 155 415 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g0840 Lele-ChrLele16 4702917 4710782 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g0840 65 596 EF-hand Containing Proteins AT3G10660 71.429 0.0 807
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Lele16g0840 Pkinase 3e-72 CL0016