Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g0826 ATGGCGACGTACTTTCATGGTAATCCTGAAATCCAACCACCCGATGGCCTCCAAACTCTGGTTCTCATGAACCCTGGCTACATCCACTATTCCGACACGCCCCCGCCCCCGCCCCCGCCTCCGCCTCCGTCGCCGCACCCCAGCAACTTGGTCTTCCTCAACTCCGTCGCGTCTAGCAACAACTCGCTTACTCCCCAAAACCTCCACCACGTGCAGCCCAATCACACCCAGCAATTCGTGGGCATCCCTCTGCCGACCGTCGCCGCCGCCTCCTCCCAGGACCCCAACCAGCAGCACTCCTCCGTGCACGCTCATCAAGATGGCTCCACCTGGCATGGATTTGTGCCTCTCATGCAGTGCAATCTCTGGAACCCAAGCGACCCAAACGCGACGGCTCGGGAGACTCCACGAGCACAGCAGGGACTGTCGCTGAGCCTGTCCTCCCAGCAAGTTGGAATGGGGTCTTTCCGTGTTGATCGTGACGTGAAATCGCAGGGTCAAGCGCCTGCTATGTCTGGCGAAGACGTTCGCGGGTTGGGTGGGTCGCCGTCTTCGGCTTCTGGGGTGACCAACATGAACGGTGTTTCGGGGATTCAGAGCGTGCTTCTAAGCTCCAAGTACTTGAAAGCAGCACAGGAACTTCTAGACGAAGCCGTCAACGTTAACAACGGCATCAAGACCGAACTGGAAAAGAAGAGCGGTAGGGCCCATACAAAAGCCACTAGGGAGACATCCGGAACAGCTGCTAGCGGCGACGGCTCTGTCGGCGGAGAAGGAAACGCTAAGCGTGCTTCTGAGCTATCAGCTGCGGAGAGACAAGAAATTCAGATGAAGAAAGCTAAGCTAATCAGCATGCTCGATGAGGTGGAGCAGAGGTACAGGCAGTACCACCAACAGATGCAGATAGTGATTTCGTCATTCGAGCAAGCTGTGGGAATTGGATCGGCCAGAACATACACAGCCCTTGCGCTGCAGACAATCTCCAAGAAGTTTCGCTGCTTGAAGGGTGCCATAACAGCCCAAATTCGAGCTGCTAATAAGAGCTTAGGAGAAGAAGATTGCTTTGGAACCAAGATTGAAGGTTCGAGGCTCAAGTACGTGGACCATCCCCTGCACCAACAGCGAGCTCTCCAACAGTTGGGAATGATACAGCACAATGCTTGGAGACCCCAGAGAGGATTGCCCGAAAGATCTGTCTCTGTTCTTCGTGCTTGGCTCTTTGAGCACTTCCTCCACCCTTATCCCAATGATTCTGACAAGCATATGCTTGTTAAGCATACAGGCCTCACTAGGAGCCAGGTTTCGAATTGGTTCATAAATGCTCGGGTTCGGCTCTGGAAACCAATGGTGGAAAAAATGTACACGGAGGAGATTAAGGAGCAAGAACAGAATGGGTCTGAAGATAAATCAAGCAAGAGCGGTGAAGATCCTGCTATTAAAACCGAAGCTCCACAACAAAGAGGCCCTGCCACTGAAACGGACGCTAGAAGCCTCAACTCCAACGAAGACACGCCTTCAAACCACAATAACAGTCCTACGGTTTCAGTTTCTAAACCTTTGATATCATCACCGACTGGGAATAATAATGTCAGAAACCAGTTTGGGTTCAGCTTCATGGGATCATCAGAGCTAGAAGGGATCACGCAAGCAAGTCCCAAGAAACCAAGAAACCAAGAAATTCTACACTTCCCAACTTCAATAAACATGGACGTGAAGCCCAATGAAGCCAATAATGAGCAACTTTCAATAAAATTCGGAGATGATGAGAGGCAGGGGAGGGAGGGATACTCGTTCCTGGGAACCCAATCAAATTTCATCGGAGGTTTTGGACAATACCCAATCGGGGAAATTGGAAGGTTTGACGCAGAACAGTTCACTCCAAGGTTTTCCGGTAATGGGGTTTCCCTGACTCTTGGTCTTCCCCACTGTGACACATTATCAGGAAGCCATCAAACTTTTCTCCCAAACCAGAACATTCGGTTGGGAAGAAGACTGGAGATGGGTGAATCAAACGAGTATGGAGCCATAAACACTTCCACTACTCTCTCATCAGCTGCATTTGAGAACATGAACATGCAGAACCCAAAGAGGTTTGCTGCACGGTTGTTGCCGGACTTTGTCACCTAA 2127 0.5129 MATYFHGNPEIQPPDGLQTLVLMNPGYIHYSDTPPPPPPPPPPSPHPSNLVFLNSVASSNNSLTPQNLHHVQPNHTQQFVGIPLPTVAAASSQDPNQQHSSVHAHQDGSTWHGFVPLMQCNLWNPSDPNATARETPRAQQGLSLSLSSQQVGMGSFRVDRDVKSQGQAPAMSGEDVRGLGGSPSSASGVTNMNGVSGIQSVLLSSKYLKAAQELLDEAVNVNNGIKTELEKKSGRAHTKATRETSGTAASGDGSVGGEGNAKRASELSAAERQEIQMKKAKLISMLDEVEQRYRQYHQQMQIVISSFEQAVGIGSARTYTALALQTISKKFRCLKGAITAQIRAANKSLGEEDCFGTKIEGSRLKYVDHPLHQQRALQQLGMIQHNAWRPQRGLPERSVSVLRAWLFEHFLHPYPNDSDKHMLVKHTGLTRSQVSNWFINARVRLWKPMVEKMYTEEIKEQEQNGSEDKSSKSGEDPAIKTEAPQQRGPATETDARSLNSNEDTPSNHNNSPTVSVSKPLISSPTGNNNVRNQFGFSFMGSSELEGITQASPKKPRNQEILHFPTSINMDVKPNEANNEQLSIKFGDDERQGREGYSFLGTQSNFIGGFGQYPIGEIGRFDAEQFTPRFSGNGVSLTLGLPHCDTLSGSHQTFLPNQNIRLGRRLEMGESNEYGAINTSTTLSSAAFENMNMQNPKRFAARLLPDFVT 708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g0826 708 MobiDBLite consensus disorder prediction 89 108 - -
Lele16g0826 708 MobiDBLite consensus disorder prediction 486 534 - -
Lele16g0826 708 Pfam Associated with HOX 201 339 IPR006563 -
Lele16g0826 708 MobiDBLite consensus disorder prediction 230 269 - -
Lele16g0826 708 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 95 471 - -
Lele16g0826 708 FunFam BEL1-like homeodomain protein 9 391 453 - -
Lele16g0826 708 MobiDBLite consensus disorder prediction 26 51 - -
Lele16g0826 708 SUPERFAMILY Homeodomain-like 389 455 IPR009057 -
Lele16g0826 708 Gene3D - 391 470 - -
Lele16g0826 708 MobiDBLite consensus disorder prediction 459 476 - -
Lele16g0826 708 SMART HOX_1 388 452 IPR001356 GO:0003677
Lele16g0826 708 SMART prehox3 196 340 IPR006563 -
Lele16g0826 708 Pfam Homeobox KN domain 405 444 IPR008422 GO:0003677|GO:0006355
Lele16g0826 708 MobiDBLite consensus disorder prediction 162 185 - -
Lele16g0826 708 ProSiteProfiles 'Homeobox' domain profile. 385 448 IPR001356 GO:0003677
Lele16g0826 708 Coils Coil 272 299 - -
Lele16g0826 708 MobiDBLite consensus disorder prediction 459 534 - -
Lele16g0826 708 CDD homeodomain 388 449 IPR001356 GO:0003677
Lele16g0826 708 MobiDBLite consensus disorder prediction 30 48 - -
Lele16g0826 708 MobiDBLite consensus disorder prediction 89 107 - -
Lele16g0826 708 Coils Coil 208 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g0826 Lele-ChrLele16 4623185 4625812 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g0826 1 707 Homeobox Transcription Factor Family AT2G35940 48.072 3.14e-173 510
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Lele16g0826 POX 1.4e-48 No_clan