LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele16g0805	ATGTCTGGCGCCATTGGAGCTTCAAACCGTCAGGCATCGCCACCAACTGAGACTTCTCAGAATCGGCCGCCACTGAAGCGTCACCTGACCTTCGCATCGACTAAACCGCCATTTGTTCCTCCGGATGATTATCACCGCTTTTCGTCTCCCAACTCTAGAAGGGCTGCCGATCAAGAACCTGAAGCTGTTGTTGTTCGATCTCCGTATATGAAGCAGAAGAGCATAGTGAATGACAACAATGCAGAGTCCCAGGAATGGAGTAATAGCCCAGTTACTAATGTAACAAGTAGTCCCCTCAAAACACCCATGTCTGCAAAAGGTGGAAGGACATACAATAAGTCCAAGGTTGCCAAAGAAGGCAAATCTGGTCCTCAGACCCCCATCTCAAATGCTGGTTCCCCTTTTCTAACTCCTGCTGGCAGCTGTCGTTATGATAGTTCCTTGGGTTTGTTGACTAAAAAGTTTATCAATTTGCTCAAGCACGCAGAGAATGGTGATCTTGACCTAAACAAAGCGGCTGAAACTTTGGAGGTGCAAAAGAGGAGGATATATGACATAACCAATGTTTTGGAAGGAATTGGTCTCATTGAGAAAAAGCTCAAAAATAGAATACACTGGAAGGGAATCAAATCTTCTACATCTGGAGAGGATGATGGTGATGTATCTATGCTGAAGGCAGATGTTGATAAGCTTTCTTTGGAAGAGCAAAGTTTAGATGATCAAATAAGGGGAATGCAGGAAAGGCTGAGAAATTTGAGCGAAGATGAAAAGAACCAGAAGTGGCTTTTTGTAACTGAAGAAGATATTAAGGGCCTACCCGGCTTGCAGAATGAAACTCTAATTGCAATTAAAGCCCCGCATGGAACCACCTTGGAGGTCCCTGATCCTGAGGAAGCCGTTGACTATCCACAGAGGAGATACAGAATAATTCTTAGAAGCACAATGGGTCCCATTGATGTGTACCTTGTCAGTCAATTTGAGGAGAAATTCGAAGAGATGAATGGCGTTGAGCCCCCTGCAAGCCTCCCACTTGCTTCAAGTTCAGGGTCCAATGAACACCTAACGACAGAAATGACCCCACTTGAGCACAATGGAAAGGGTCTTGAATCTCAAACTCAACCGTCTTCGTATACATGCTCTGATCTAAATGCTTCACCAGAGTTCGGTGGTGGCATTATGAAAATTGTTCCTTCTGATGTTGATAATGATGCGGATTACTGGCTACTATCAGATGCTGACGTTAGCATTACCGATATGTGGAGGACTGATTCCAGTGTTGATTGGAATGGGGTGGACATGCTTCCCTCTGATTTTGGAGTCATCTCAAGGCCACAAACTCCATCATCTGGGTTTGCTGATGGACCATCCACATTAGCTAACTCTAATCAGAGGTTATGCTTGATGGAAGATCTAGCTTGA	1419	0.4475	MSGAIGASNRQASPPTETSQNRPPLKRHLTFASTKPPFVPPDDYHRFSSPNSRRAADQEPEAVVVRSPYMKQKSIVNDNNAESQEWSNSPVTNVTSSPLKTPMSAKGGRTYNKSKVAKEGKSGPQTPISNAGSPFLTPAGSCRYDSSLGLLTKKFINLLKHAENGDLDLNKAAETLEVQKRRIYDITNVLEGIGLIEKKLKNRIHWKGIKSSTSGEDDGDVSMLKADVDKLSLEEQSLDDQIRGMQERLRNLSEDEKNQKWLFVTEEDIKGLPGLQNETLIAIKAPHGTTLEVPDPEEAVDYPQRRYRIILRSTMGPIDVYLVSQFEEKFEEMNGVEPPASLPLASSSGSNEHLTTEMTPLEHNGKGLESQTQPSSYTCSDLNASPEFGGGIMKIVPSDVDNDADYWLLSDADVSITDMWRTDSSVDWNGVDMLPSDFGVISRPQTPSSGFADGPSTLANSNQRLCLMEDLA	472

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele16g0805	472	MobiDBLite	consensus disorder prediction	1	136	-	-
	Lele16g0805	472	CDD	E2F_DD	224	325	IPR032198	GO:0046983
	Lele16g0805	472	SUPERFAMILY	"Winged helix" DNA-binding domain	143	206	IPR036390	-
	Lele16g0805	472	MobiDBLite	consensus disorder prediction	72	103	-	-
	Lele16g0805	472	SUPERFAMILY	E2F-DP heterodimerization region	221	325	IPR037241	-
	Lele16g0805	472	Gene3D	-	218	325	-	-
	Lele16g0805	472	Pfam	E2F/DP family winged-helix DNA-binding domain	145	208	IPR003316	GO:0005667\|GO:0006355
	Lele16g0805	472	MobiDBLite	consensus disorder prediction	1	27	-	-
	Lele16g0805	472	Gene3D	-	137	210	IPR036388	-
	Lele16g0805	472	Pfam	E2F transcription factor CC-MB domain	224	324	IPR032198	GO:0046983
	Lele16g0805	472	PANTHER	TRANSCRIPTION FACTOR E2F	78	425	IPR015633	GO:0000978\|GO:0006357
	Lele16g0805	472	MobiDBLite	consensus disorder prediction	336	355	-	-
	Lele16g0805	472	Coils	Coil	228	255	-	-
	Lele16g0805	472	MobiDBLite	consensus disorder prediction	341	355	-	-
	Lele16g0805	472	FunFam	E2F transcription factor 1	137	210	-	-
	Lele16g0805	472	SMART	E2F_TDP_2	143	208	IPR003316	GO:0005667\|GO:0006355

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele16g0805	Lele-ChrLele16	4510852	4515304	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele16g0805	23	464	E2F-DP Transcription Factor Family	AT2G36010	59.611	5.74e-173	493

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	E2F-DP	Lele16g0805		E2F_CC-MB	1.5e-33	No_clan