Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g0800 ATGATTCGTGGCGGCTTGAGATCATCGGATCGTTTGTTCTTCGAACCAGACCAAACCAGCTCCATATTAGAGGCTAAATCATCGGTGACAACTTTGACATTCAAAGACACCCTCGTGCTGTCCATGGAATCCCAGGATCCCTTCGTGGATTTTCGCAAGTCCATGGAGGAGATGGTGGAGGCTCACGGCGTTAAGGACTGGGACAGTCTCGAGGAACTCTTGTGTTGGTATCTGAGGGTCAACACTAAGAGCAATCACGGCTATATTATGGGTGCTTTCGTTGATTTATTGCTCGTTCTTTCTTTGTCTTCTGAATCTTCTTCCCTATCTTCTGCTTCTTCTCATTCTCACTCTCCCTCTTCTCATCTCTCTTTGTATACTACTTCTTCTCCCTCTTCTTCTTTTACTACTCCTTGCGCTTCGTGTCTGGAAGTTGAGCAAGATGTTCAAGTGAAGCAGGGGATTAAACGTGAAGACGAGGCCTCCTCGTCTTCAACCGTTTGA 504 0.4643 MIRGGLRSSDRLFFEPDQTSSILEAKSSVTTLTFKDTLVLSMESQDPFVDFRKSMEEMVEAHGVKDWDSLEELLCWYLRVNTKSNHGYIMGAFVDLLLVLSLSSESSSLSSASSHSHSPSSHLSLYTTSSPSSSFTTPCASCLEVEQDVQVKQGIKREDEASSSSTV 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g0800 167 MobiDBLite consensus disorder prediction 111 138 - -
Lele16g0800 167 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 40 101 IPR006458 -
Lele16g0800 167 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 8 100 IPR038933 GO:0045892
Lele16g0800 167 Coils Coil 167 167 - -
Lele16g0800 167 Pfam Transcriptional repressor, ovate 44 100 IPR006458 -
Lele16g0800 167 ProSiteProfiles OVATE domain profile. 40 99 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g0800 Lele-ChrLele16 4489325 4489828 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Lele16g0800 Ovate 2.6e-24 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g1031 05 6406548 6408196 Lele16g0800 16 4489325 4489828 CCT
Lele13g1629 13 25193823 25194512 Lele16g0800 16 4489325 4489828 hybridization
Lele14g1563 14 23567115 23567804 Lele16g0800 16 4489325 4489828 hybridization