Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g0767 ATGGATTCTGCAGCTCGACGAAGCAGAGGGGGCCTTCTCGAAGGCCTATACAAGGTGATTATGCGTCGGAACTCTGTCTATGTCACCTTTATTATTGCCGGCGCTTTCCTAGGAGAACGGGCCGTGGATTACGGAGTTCACAAGCTCTGGGAGTACAATAATGTCGGGAAACGATATGAAGACATTCCTGTTTTGGGGCAAAGGCCATCAGAAGATAAGCTGCAAAGTGAGGCACTGAGAGAGATGAAGATTTGCATGCTTGGTGATGCTCATCATGTGGAAGAGGCGGGAAAAATAGGGTTGGACTACATGGATGTGGAAGGGCTGAAAAAACTTAATAAAAACAAGAAGCTGGTCAAGAAGCTTGCCAAGAAGTACCATGCATTTTTAGCATCTGAAGCAGTCATCAAGCAAATCCCTCGTCTTTTGGGCCCTGGTAAGTGTCCAACACTGGTGACTCATCAAGAATCCTTGGAGTCGAAAGTTAATGAAACAAAAGCAATGGTGAAGTTTCAACTTAAGAAAGTTCTTTGTATGGGTGTTGCTGTTGGAAACTGCACAATGGAGGAGAAGCAGATCTTCCAGAACGTACAACTTAGTGTCAATTTCCTGGTTTCCTTATTAAAGAAGAATTGGCAAAATTTGAGTTGCTTGTACCTTAAGAGTACTATGGGGAGGGCCATCCGAGTTTTTAGATCCCATTACTTCCATTCCAGCTGTAGGGTTATCAGTGGCGAAGCTGTGGTGTGCAATATAAGCATATTTGATAACTAA 774 0.4393 MDSAARRSRGGLLEGLYKVIMRRNSVYVTFIIAGAFLGERAVDYGVHKLWEYNNVGKRYEDIPVLGQRPSEDKLQSEALREMKICMLGDAHHVEEAGKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIPRLLGPGKCPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNCTMEEKQIFQNVQLSVNFLVSLLKKNWQNLSCLYLKSTMGRAIRVFRSHYFHSSCRVISGEAVVCNISIFDN 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g0767 257 CDD Ribosomal_L1 80 230 IPR028364 -
Lele16g0767 257 SUPERFAMILY Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 12 63 IPR036656 GO:0005750|GO:0006122
Lele16g0767 257 Pfam Ribosomal protein L1p/L10e family 78 225 IPR028364 -
Lele16g0767 257 SUPERFAMILY Ribosomal protein L1 77 231 IPR023674 -
Lele16g0767 257 Pfam Ubiquinol-cytochrome C reductase, UQCRX/QCR9 like 15 63 IPR008027 GO:0005750|GO:0006122
Lele16g0767 257 FunFam cytochrome b-c1 complex subunit 9 10 64 - -
Lele16g0767 257 PANTHER RIBOSOMAL PROTEIN L7AE FAMILY MEMBER 94 225 - -
Lele16g0767 257 Gene3D - 81 169 IPR016095 -
Lele16g0767 257 Gene3D - 11 64 IPR036656 GO:0005750|GO:0006122
Lele16g0767 257 FunFam Ribosomal protein 85 169 - -
Lele16g0767 257 FunFam Ribosomal protein 152 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g0767 Lele-ChrLele16 4313137 4319266 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g0767 69 231 Cytoplasmic Ribosomal Protein Gene Family AT1G08360 77.143 1.36e-75 227