Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g0757 ATGACTGTCTCTTACCATAAGAAGCAGATCTTCAATGGTTATGAGCTCTTCCCATCTGCTGTCACCGACAGGCCCAGGGTACACATTGATGGACTCGATCTGAGGTCCTTCTATACCCTTGTGATGACTGACCCAGACGTCCCTGGTCCCAGTGATCCTTATCTCAGAGAACACTTGCACTGGATGGTGACAGATATTCCAGGCACAACAGATGCCACATTTGGAAAAGAGGTGGTGAGCTATGAGATGCCAAAACCAAACATAGGGATACACAGGTACGTGTTTGTGCTGTTCAAGCAAAACCGAAGGCAGTGTGTGAGAGCGCCTTCTGTGTCTTCGTCTTCTTCAAGGGATCAATTCAACACTCGCCATTTCGCTGCACAAAACGACCTTGGCCTCCCTGTTGCTGCTGTTTACTTCAACGCACAGAGGGAAACTGCTTCTCGAAGGCGCTGA 456 0.4912 MTVSYHKKQIFNGYELFPSAVTDRPRVHIDGLDLRSFYTLVMTDPDVPGPSDPYLREHLHWMVTDIPGTTDATFGKEVVSYEMPKPNIGIHRYVFVLFKQNRRQCVRAPSVSSSSSRDQFNTRHFAAQNDLGLPVAAVYFNAQRETASRRR 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g0757 151 CDD PEBP_euk 1 142 IPR035810 -
Lele16g0757 151 FunFam Terminal flower 1 1 151 - -
Lele16g0757 151 Pfam Phosphatidylethanolamine-binding protein 25 140 IPR008914 -
Lele16g0757 151 Gene3D - 1 151 IPR036610 -
Lele16g0757 151 SUPERFAMILY PEBP-like 1 145 IPR036610 -
Lele16g0757 151 PANTHER PHOSPHATIDYLETHANOLAMINE-BINDING PROTEIN 2 146 IPR035810 -
Lele16g0757 151 ProSitePatterns Phosphatidylethanolamine-binding protein family signature. 38 60 IPR001858 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g0757 Lele-ChrLele16 4270210 4272133 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g0940 06 5791895 5792647 Lele16g0757 16 4270210 4272133 CCT
Lele08g0927 08 5834064 5834816 Lele16g0757 16 4270210 4272133 CCT
Lele13g1665 13 25389421 25391393 Lele16g0757 16 4270210 4272133 hybridization
Lele14g1608 14 23782286 23785547 Lele16g0757 16 4270210 4272133 hybridization