Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g0751 ATGGATCTCTGTTCCAAGTGCTACGGGGATTTCCGTTTGAAGGAGCAACAAGAAGCCTCCAGCAAATCCAACATCGAAACCGCCCTCTCCTCCCCTGCTGCGCCGTCCTCAGGATCATCGCTGTTGCCGACGGTGGAGTCCCCCGCTCCTCCTCCGATGTTAACGTTGCCGGAGGTTGCAGTGCATGCGTCGAGCTCGGCCGTCGCATCAACCGGGCCGGAAGTGGCTACCGCGCAACCGAACCGATGCGCTACATGCCGGAAACGGGTCGGGCTGACGGGGTTCCAGTGCAAGTGCGGTGTCACGTTTTGTGGGACCCACAGGTATCCCGAGAAACACGGGTGTAGCTTCGATTTCAAGAAGGTGGGCCGAGAGGAAATAGCTCGGGCAAACCCTTTGATCAAGGCAAAGAAGCTCGAGACGATTTAA 429 0.5804 MDLCSKCYGDFRLKEQQEASSKSNIETALSSPAAPSSGSSLLPTVESPAPPPMLTLPEVAVHASSSAVASTGPEVATAQPNRCATCRKRVGLTGFQCKCGVTFCGTHRYPEKHGCSFDFKKVGREEIARANPLIKAKKLETI 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g0751 142 SMART AN1_Zf_4 83 120 IPR000058 GO:0008270
Lele16g0751 142 MobiDBLite consensus disorder prediction 16 53 - -
Lele16g0751 142 SUPERFAMILY AN1-like Zinc finger 71 137 IPR035896 -
Lele16g0751 142 MobiDBLite consensus disorder prediction 20 44 - -
Lele16g0751 142 Gene3D - 59 138 IPR035896 -
Lele16g0751 142 ProSiteProfiles Zinc finger AN1-type profile. 77 123 IPR000058 GO:0008270
Lele16g0751 142 FunFam Zinc finger AN1-type containing 6 58 138 - -
Lele16g0751 142 Pfam AN1-like Zinc finger 83 119 IPR000058 GO:0008270
Lele16g0751 142 PANTHER AN1-TYPE ZINC FINGER PROTEIN 1 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g0751 Lele-ChrLele16 4250515 4250943 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g0751 1 142 C2H2 Transcription Factor Family AT3G52800 51.724 6.45e-36 120
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g0948 06 5831933 5835405 Lele16g0751 16 4250515 4250943 CCT
Lele07g1121 07 6764995 6768392 Lele16g0751 16 4250515 4250943 CCT
Lele08g0936 08 5879285 5882423 Lele16g0751 16 4250515 4250943 CCT
Lele13g1670 13 25410177 25410605 Lele16g0751 16 4250515 4250943 hybridization
Lele14g1614 14 23806368 23807882 Lele16g0751 16 4250515 4250943 hybridization