LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele16g0748	ATGATACCCAGACCCAGCAAGGTGATTGGAGCAAGATACTATAAAATCGATCATAAAGGTCCATATGATGCGAATCTTAGTCCAGTGGACGATGAGGGTCACGGCACCCACACGGCAGCCACGGTGGCAGGCATGCCGGTGGCCGGAGCTAGTCTCTATGACTTGGGGAAAGGCACCGCACGTGGTGGCATACCATCTGCTCGCATTGCCGTGTACAAAGTTTGCTGGATCATAGGATGCAGCGACATGAACATCTTGGCCGGCTTCGATGATGCCATCGCCGATGGAGTCGACTTCATATCGTTGTCTGTAGGTGGCCCACCCAGGGAGTTCTTCAGGGACCCAATAGCCATCGGAGCATTTCATGCAATGAAAAGAGGGATTCTCACTTCTTGCTCCGCCGGGAACAACGGTCCGAGCACCATGACTGTCGAGAACGTTGCTCCATGGATTCTCACGGTGGCTGCTTCTACTACTGATAGGCAGTTCACCACAGAGGTAGCCCTCGGCAATGGCAAGAAAGTTACAGGACTGTCGATTAATACCTTTTCACCTAGGAAGAAGATGTATCCTTTGACTAGTGGAGCCCTTACTAGCAACAACAGCAAAGATAGCTATGGAAATGCGAGTGCTTGTGAATACGGGGCTCTGAACAAGGAAAAGGTGAAGGGGAGGATTGTGTACTGCCTTGATGGAATGGGCGGCCAGGATTACGTCATAGAAGAATTAGGAGGCGTAGGAACCATTATGAACATACCGGAGCCAACGGACGTGGCCATCACCACGCTTATTCCAGGCACCTACGTGGAGGCCTTTACTGCCGGCAAAACCATCGAGCTTTACACCAATTCCACCAAGAATCCTCGAGCTACTATATTCAAGACAACAACTAAAAGAGTCCCAGCTCCATTTCTTGCTTCCTTCTCATCCAAAGGTCCTCAAATTCTCGGCCCCAACATCCTCAAGCCTGACTTAGCTGCTCCGGGAGTGGACATACTGGCTTCTTATTCCAAACTGACAACGATAACAGGGTACCCTGAAGACAAGAGACACAACGTCTTCAATATACTGTCTGGAACATCTATGTCGTGCCCACATGTCACTGCGGCTGCTGCTTACGTCAAGTCCTTCCACCCAGATTGGACTCCTATTGCTATCAAATCTGCTCTCATGACCACTGCCACTCCGATGAAAATTGGTCGAGATAAGCGGGCGGAGCTGGGACCAGGGTCAGGACAGATTAATCCGAGAGGAGCATTGCATCCTGGACTAGTGTACGACATTAGACTCGACTCTTATGTTGCTTTCCTATGCAAGCGCGGTTACAACAACACCGTCATTGGTCTGCTAGTTGGCAACAAAAGGGTGAATTGCTCCACCGTGAAGCCTCCACAAGGCACTGATGGAATCAATTACCCCTCCATGCATATGCAACTCAGGACTCATAATTCTAGCATTGCGGCGGTGTTTCATCGAACGCGTGATGATCCCTCCGTTGTTTTTCAAGCCGTCATGCATTCTCGGATAGGCTGTAGATCAGCGCATGAAAACATGAAAACGAAACGATCCAAGCAACTTGAACATAGGCACTGA	1593	0.4991	MIPRPSKVIGARYYKIDHKGPYDANLSPVDDEGHGTHTAATVAGMPVAGASLYDLGKGTARGGIPSARIAVYKVCWIIGCSDMNILAGFDDAIADGVDFISLSVGGPPREFFRDPIAIGAFHAMKRGILTSCSAGNNGPSTMTVENVAPWILTVAASTTDRQFTTEVALGNGKKVTGLSINTFSPRKKMYPLTSGALTSNNSKDSYGNASACEYGALNKEKVKGRIVYCLDGMGGQDYVIEELGGVGTIMNIPEPTDVAITTLIPGTYVEAFTAGKTIELYTNSTKNPRATIFKTTTKRVPAPFLASFSSKGPQILGPNILKPDLAAPGVDILASYSKLTTITGYPEDKRHNVFNILSGTSMSCPHVTAAAAYVKSFHPDWTPIAIKSALMTTATPMKIGRDKRAELGPGSGQINPRGALHPGLVYDIRLDSYVAFLCKRGYNNTVIGLLVGNKRVNCSTVKPPQGTDGINYPSMHMQLRTHNSSIAAVFHRTRDDPSVVFQAVMHSRIGCRSAHENMKTKRSKQLEHRH	530

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele16g0748	530	SUPERFAMILY	Subtilisin-like	14	420	IPR036852	GO:0004252\|GO:0006508
	Lele16g0748	530	ProSiteProfiles	Serine proteases, subtilase domain profile.	1	420	-	-
	Lele16g0748	530	ProSitePatterns	Serine proteases, subtilase family, serine active site.	359	369	IPR023828	-
	Lele16g0748	530	Gene3D	Peptidase S8/S53 domain	6	433	IPR036852	GO:0004252\|GO:0006508
	Lele16g0748	530	Pfam	Subtilase family	23	397	IPR000209	GO:0006508\|GO:0008236
	Lele16g0748	530	Gene3D	-	160	298	-	-
	Lele16g0748	530	PRINTS	Subtilisin serine protease family (S8) signature	358	374	IPR015500	-
	Lele16g0748	530	PRINTS	Subtilisin serine protease family (S8) signature	30	43	IPR015500	-
	Lele16g0748	530	PANTHER	PROPROTEIN CONVERTASE SUBTILISIN/KEXIN	6	490	IPR045051	-
	Lele16g0748	530	CDD	PA_subtilisin_like	169	292	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele16g0748	Lele-ChrLele16	4234684	4237314	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele16g0748	6	393	Subtilisin-like Serine Gene Family	AT5G03620	59.848	2.49e-164	477