Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g0747 ATGGAATCAGAGAAGGGCTTTGCCAGCACCTCTGCTTCTTCGTCCGCGTGGCCGGATAGGTTGGGTGGCGAGGCGGATCGGCATGTGAAGACGGAGATTGAAGCGGCGGAGACTCTGGCTGAGTTGGCCCGCTTGGCGATGCGTGAGACTGCCTCTCACTCCGGAGATAAACAGTGCAAGAAAGGCAAACGGCGGCTCGCCCGCGAGTCACCGACCAATGACTCGGGGTTGAACGGGCTCGACTCAGTCTCCAAATGTCCGGTTCTCTGCCGGGACCAAGCTGTTGAAGGTCATCAGCCACATCAACAAATATCTGCAAGTGATACAAAAAAGGTTCAACAGGATGTCTGCTTAAGACAAGTTAAGATGGAGCAGGATGCTGATATACCTAAGACAAGCACTGTGTGCACAAATTACTCTTTGGTTGGCTGCAGTAAGTCGAGGAGTAATTTAACTGAGGAAGAAAAGGAGGCGCGGAGGATACGCAGGGTGTTGGCAAACAGAGAGTCAGCTAGGCAGTCAATTCGCCGTAGGCAGGAGAAGGAGTTGGCTTTGAAAGAGTACCAATCTTTGGAGAACACAAATAAGCACTTGAAGGCACAAATAGCCAAGTCTGTAAGTACCATAGTGGAGAAAACTCCAGTTGAGAATGACTTGCCTGGATCTGAGATAACGTCTTCATCCATGAGTAATGGTCCATGGTTCCTTTGTAGCCAATTCCCAGTAACACAGTTATTTTTGCCTTCTGTCATCCAGTCTTCCGATCCTGTTCAATTTCAACATCAGCCTCATAATTCCACTCCCATACCATCAAATGTTTCTTCTGATACTGACTTATGCCACAAACAAACCAACCATACACAGGACAATGAAATACAAAATCCATTATACCTGTTTCCGTGTAAACCATGTAGTATTAGTTCATCTCCAAATACAACGGCAAATAAGGGCAATCAGGCTACTTTACCTTTCAAAATCAAAACAGAAGCTTCTGGCTTGACAGAAGCCAGACCTATTGATGACCCAAATCACACCACTCCCAAGTTTTCTTTGGATGGAGATGAGCAGCGAAGAGGATGTCGCATTATGGAAAGATATCATGGACAGTCACTTGGTTGTATTCGTCACCCTACTGCTGTCAAGGAAGAACATGGCCTTCAGTTACATCCTGCTCCCGATAATGAGGTATCTTCAACAGCTTCTCATACTGCAGATTCCTTACTGGAAAAGAAACAAGAACAAGACATATACTCAGGTAAAAATCTAGTGGATGCAATTGCTGCAGCTGAGGCAAGAAAGAGCAGAAAGTAG 1311 0.4622 MESEKGFASTSASSSAWPDRLGGEADRHVKTEIEAAETLAELARLAMRETASHSGDKQCKKGKRRLARESPTNDSGLNGLDSVSKCPVLCRDQAVEGHQPHQQISASDTKKVQQDVCLRQVKMEQDADIPKTSTVCTNYSLVGCSKSRSNLTEEEKEARRIRRVLANRESARQSIRRRQEKELALKEYQSLENTNKHLKAQIAKSVSTIVEKTPVENDLPGSEITSSSMSNGPWFLCSQFPVTQLFLPSVIQSSDPVQFQHQPHNSTPIPSNVSSDTDLCHKQTNHTQDNEIQNPLYLFPCKPCSISSSPNTTANKGNQATLPFKIKTEASGLTEARPIDDPNHTTPKFSLDGDEQRRGCRIMERYHGQSLGCIRHPTAVKEEHGLQLHPAPDNEVSSTASHTADSLLEKKQEQDIYSGKNLVDAIAAAEARKSRK 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g0747 436 Coils Coil 181 201 - -
Lele16g0747 436 MobiDBLite consensus disorder prediction 1 29 - -
Lele16g0747 436 MobiDBLite consensus disorder prediction 389 412 - -
Lele16g0747 436 MobiDBLite consensus disorder prediction 50 70 - -
Lele16g0747 436 PANTHER G-BOX-BINDING FACTOR 3-RELATED 66 234 IPR044827 GO:0003700|GO:0006355|GO:0043565
Lele16g0747 436 MobiDBLite consensus disorder prediction 1 17 - -
Lele16g0747 436 MobiDBLite consensus disorder prediction 47 79 - -
Lele16g0747 436 CDD bZIP_plant_GBF1 160 203 IPR045314 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g0747 Lele-ChrLele16 4229193 4234091 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g0747 47 436 bZIP Transcription Factor Family AT1G19490 30.377 5.46e-26 108