Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g0746 ATGAAGGTGATCGCCTCTTATTTGCTCGCTGTTTTGGGCGGGAACAACTCTCCGTCATCTGCTGATCTCAAGGGCATACTTGGATCTGTCGGAGCAGAGGTTGAAGATGACAGGATTGAACTTCTTTTGTCTGAAGTCAAGGGTAAAGACATAACAGAGCTGATAGCCAGCGGTAGGGAAAAGTTGGCCTCTGTGCCTTGTGGCGGTGCTGCAGTTACAATGGCCGCCGCACCTGGTGGAGCGGGTGGTGCGGCTCCAGAGGTAGCCGAGCCAAAGAAGGAGGAAAAGGTCGAGGAGAAAGAAGAATCCGATGATGACATGGGCTTCAGTCTCTTTGATTAA 342 0.5146 MKVIASYLLAVLGGNNSPSSADLKGILGSVGAEVEDDRIELLLSEVKGKDITELIASGREKLASVPCGGAAVTMAAAPGGAGGAAPEVAEPKKEEKVEEKEESDDDMGFSLFD 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g0746 113 MobiDBLite consensus disorder prediction 76 113 - -
Lele16g0746 113 Gene3D - 1 59 IPR038716 -
Lele16g0746 113 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN FAMILY MEMBER 1 113 IPR044076 GO:0002182|GO:0003735|GO:0022625
Lele16g0746 113 FunFam 60S acidic ribosomal protein P2 1 59 - -
Lele16g0746 113 CDD Ribosomal_P2 1 113 IPR044076 GO:0002182|GO:0003735|GO:0022625
Lele16g0746 113 Pfam 60s Acidic ribosomal protein 17 112 - -
Lele16g0746 113 Hamap 50S ribosomal protein L12 [rpl12]. 2 113 IPR027534 GO:0003735|GO:0005840|GO:0006414
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g0746 Lele-ChrLele16 4227451 4228138 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g0746 1 69 Cytoplasmic Ribosomal Protein Gene Family AT2G27710 76.812 3.05e-31 104