Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g0738 ATGGACTTGTATCTGAAGCAATGGAGAAACCCGGATGAGTCAGTGGCAGAGGAACATCATTCTACAAAGATGCCAAAACTTGTTCTCGAACTTCATCAAAAGCCTCAATCATCTGCCTCTGCTCTCCCTCTGTTTGTACCCCAACCCAACACTAAAGTCAGCACCTTGTCAGCATTCTCTGATTCAACCTCGGCTTCTCCCAGACCTTCCCGGATGGGGAGTTATTTCAGCTTGGCTCAGTGGCAGGAGCTTGAGTTGCAGGCTTTGATTTTCAGGTACATGTTAGCAGGCGCTGCGGTGCCTCCTGAGCTTCTTCATCCAATCAAGAAAAGCTTTCTTCAATCTCCTTCCTATTTCCTCCAACACTACCAACACTATGATCCAGCCTTAGCATTGCAATCAGGGTATTGGGGAAGGGCAGCCATGGATCCAGAGCCTGGCCGGTGCCGGAGGACTGACGGCAAAAAGTGGCGGTGCTCGAGGGACGTGGTTGCTGGCCAGAAGTACTGCGAGCGCCACATGCATCGCGGTCGAAACCGTTCAAGAAAGCCTGTGGAACTACCCACACCAAACGCTCCCGGCGGCGGCGGAGGCTCTGTCGGTGCTCCAATATCTATGCCTGCGCCGTCATTGTCCACCGCTTCACTGAGTTCCCCCTTCGATCTCCATCTTCATCAAAGGTAA 684 0.5249 MDLYLKQWRNPDESVAEEHHSTKMPKLVLELHQKPQSSASALPLFVPQPNTKVSTLSAFSDSTSASPRPSRMGSYFSLAQWQELELQALIFRYMLAGAAVPPELLHPIKKSFLQSPSYFLQHYQHYDPALALQSGYWGRAAMDPEPGRCRRTDGKKWRCSRDVVAGQKYCERHMHRGRNRSRKPVELPTPNAPGGGGGSVGAPISMPAPSLSTASLSSPFDLHLHQR 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g0738 227 ProSiteProfiles QLQ domain profile. 75 110 IPR014978 GO:0005524|GO:0005634|GO:0006355
Lele16g0738 227 Coils Coil 227 227 - -
Lele16g0738 227 Pfam WRC 144 186 IPR014977 -
Lele16g0738 227 MobiDBLite consensus disorder prediction 171 227 - -
Lele16g0738 227 PANTHER GROWTH-REGULATING FACTOR 5 55 207 IPR031137 GO:0005634|GO:0006351|GO:0032502
Lele16g0738 227 SMART QLQ_2 74 110 IPR014978 GO:0005524|GO:0005634|GO:0006355
Lele16g0738 227 MobiDBLite consensus disorder prediction 206 227 - -
Lele16g0738 227 Pfam QLQ 76 108 IPR014978 GO:0005524|GO:0005634|GO:0006355
Lele16g0738 227 ProSiteProfiles WRC domain profile. 143 187 IPR014977 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g0738 Lele-ChrLele16 4180847 4181974 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g0738 1 189 GRF Transcription Factor Family AT2G36400 60.804 1.37e-68 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Lele16g0738 WRC 1.1e-22 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g1095 05 6808068 6809993 Lele16g0738 16 4180847 4181974 CCT
Lele13g1686 13 25485597 25487317 Lele16g0738 16 4180847 4181974 hybridization
Lele14g1624 14 23867529 23868663 Lele16g0738 16 4180847 4181974 hybridization