Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g0732 ATGGAAATGGAGGATCATCATCATCAACAGCAGCAACAGCAACATCTCGAGTATGGTGCTATGGGGGATCTCCGTCACCTCATGACTGCACCGAGGTCGCTCTCGGCCGACGTCTTCCCGGCTCAACCGAATTTCACCCCCACCCACCACTACGACCCCTTGCCCTTCGCTCGTCATCAACTGATGCCTGCTATCATGCCTCGCGGCGTTCACGATTCTTCTGCTCTTAATACTAGCATTTCTGTGGCAACTCCAGCCGCCGTCACCGCCACTACTCCCGCGCTTAGTGCCTTTGAGGCTGACACTTCCGGTTGTTTCCCCGGAGACGCCTCCACCGCACGATGGCCGAGGCAGGAAACTCTCACGCTTCTTGAGATCAGATCTCGTCTTGACTCTAAGTTCAAACACGCCAATCAAAAGGGCCCCTTATGGGATGAACTTTCTAGAATCATGGCCGAAGAATATGGATATCAAAGGAGCGGCAAAAAATGCAGGGAAAAGTTCGAGAACTTGTATAAATATTACAAGAAAACAAAGGAAGGTAAGGCAGGAAGACAAGATGGGAAGCATTACAGATTCTTTCGCCAACTTGAAGCCTTATATGGAGAAAACAACAACCCAACCTCGGTCCAAGAAACCAATTTCGGTAACAACAGTCTTCACTTTCAGAACCCCTCCCAAACAAACCAAGACATTTTTAATAGGCACTGTGATAGCGTCAGCCTCACTAATAACTCCACCGAGCTGGACACATCATCATCGGATGAAAATGATTCCATGGAGAAGAGGAGAAAGAGAAGAGGAAAAAGCTGGAAAGCAAAGATAAAAGAGCTGATAGATTCAGAGATGAAGAAGGTGATAGAGAAGCAAGAGGCATGGTTGGAGAGATTAATGAGGACACTGGAAGAGAAGGAAAAGGAGAGGGCGTTGAGAGAAGAAGAATGGAGTAGACAAGAGGCAGCCAGGTTAAATAAGGAGCATAAGTTTTGGGCTAAAGAGAGGGCATGGATTGAAGCCAGAGACGCAGCTTTAGTGGACTCATTGCAAAAATTAACAGGGAGAGAAATAAAGGCCGGTGATCCACCTGCTGCTGATGTTCAAAATTACAGCGAAAACCAGAATGAAGATGGAAGTGAAATACTACATAGCTCTGACAGAGTTGGTGAGAGTTGGACAGAATCCGAGATCACTACTCTCGTTCAGATGAGAGCTGAGGTGGAATCCAGGTTTGGGCAAAGTGGGTGTCCGGAGGAGGTTCTGTGGGAGGAAGTTGCCAACAAAATGGCTTGTTTTGGCCACCATAAGGCTGCTTCCGTGTGCAAAGACAGGTGGGAAATTATCAGAAGCTATCATAAGAAGAATAAGCAAAATTCAGCTAGTTTTTACTTGCAAACCAATAATCAGTCAGCCCTATATAATCAAGCGAGTGTTTATTGTGGTGATGTCAACCAACAGCGGCAGGATGGTTCTTCACCTTCAAATTCTAACGTTGGCAATGCTGCTAGGGCTGATAGTTGTTTTCCCTTGTTTATGTGTGAAGCAGAAAATATGTGGGAAAATTTCGGCTTAAAGTTCAACAAAGGAAACCAAAACCCGTGA 1599 0.4622 MEMEDHHHQQQQQQHLEYGAMGDLRHLMTAPRSLSADVFPAQPNFTPTHHYDPLPFARHQLMPAIMPRGVHDSSALNTSISVATPAAVTATTPALSAFEADTSGCFPGDASTARWPRQETLTLLEIRSRLDSKFKHANQKGPLWDELSRIMAEEYGYQRSGKKCREKFENLYKYYKKTKEGKAGRQDGKHYRFFRQLEALYGENNNPTSVQETNFGNNSLHFQNPSQTNQDIFNRHCDSVSLTNNSTELDTSSSDENDSMEKRRKRRGKSWKAKIKELIDSEMKKVIEKQEAWLERLMRTLEEKEKERALREEEWSRQEAARLNKEHKFWAKERAWIEARDAALVDSLQKLTGREIKAGDPPAADVQNYSENQNEDGSEILHSSDRVGESWTESEITTLVQMRAEVESRFGQSGCPEEVLWEEVANKMACFGHHKAASVCKDRWEIIRSYHKKNKQNSASFYLQTNNQSALYNQASVYCGDVNQQRQDGSSPSNSNVGNAARADSCFPLFMCEAENMWENFGLKFNKGNQNP 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g0732 532 Gene3D - 115 177 - -
Lele16g0732 532 Gene3D - 391 453 - -
Lele16g0732 532 MobiDBLite consensus disorder prediction 243 268 - -
Lele16g0732 532 PANTHER FI21293P1 102 494 - -
Lele16g0732 532 FunFam trihelix transcription factor PTL-like 115 177 - -
Lele16g0732 532 SMART sant 387 450 IPR001005 -
Lele16g0732 532 SMART sant 111 174 IPR001005 -
Lele16g0732 532 MobiDBLite consensus disorder prediction 357 387 - -
Lele16g0732 532 ProSiteProfiles Myb-like domain profile. 107 172 IPR001005 -
Lele16g0732 532 ProSiteProfiles Myb-like domain profile. 383 448 IPR001005 -
Lele16g0732 532 CDD GT1 114 179 - -
Lele16g0732 532 Pfam Myb/SANT-like DNA-binding domain 114 200 IPR044822 -
Lele16g0732 532 Pfam Myb/SANT-like DNA-binding domain 390 458 IPR044822 -
Lele16g0732 532 FunFam Trihelix transcription factor GT-2 391 453 - -
Lele16g0732 532 Coils Coil 287 326 - -
Lele16g0732 532 CDD GT1 391 455 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g0732 Lele-ChrLele16 4138163 4140584 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g0732 12 527 Trihelix Transcription Factor Family AT5G03680 42.159 2.04e-131 393
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Lele16g0732 Myb_DNA-bind_4 7.7e-19 CL0123