Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g0726 ATGGAAGAAAAAGATGTCCATGTTTTCGGGTCACCCGGAAACTCAGGCTCCGGGCAGCCTCTCCAACCCGTCGGAGTCTCCGTGCCTCAGGTAACGAACATGACGGTGAATATGAACCTGCAGAATAGTGGAGGCCCAACAGTTGGAGACGCCGCAACAATGACATCGCCTGCAAGTACCGGAGGAGGTAGGCCGGGAAGTTTTGATTTGTTCGGGAAAAAGAAGAGAGGGAGGCCGAGAAAATATGATTCAGATGGGAAGCCAAGGGTGACGACGACATCGTATCAGGGTGCACCATCACAACAAGGCTTTTCTTTGTCCCCAAGTTCACCTTCTGAATTCTCCTCCAAAAGGGGTCGAGGCAGGCCACCTGGCTCCGGCAACTGGCAGCTTCTCGCATCTCTAGGTGAGTTGTTTGCAAACACAGCAGCTGGAGATTTCACACCTCATGTCGTCACTGTTCATACTGGAGAGGATGTCGCCGGAAAAATCCTGTCATTTGCCCAGAAAGGCACCAGAGGAGTTTGCGTTCTTTCTGCCAATGGAGCTATATCTAATGTCACTCTACGGCAGCCTGGTTCTTCCGGTGGCTTATTAACATACGAGGGTCGGTTCGAGATCCTGTCTCTGTCAGGGTCATACACAGCGTCTGATAATGGGGGCATAAAAAGTCGAACCGGTGGGTTGAGTGTCTCACTGGCTGGCCCTGACGGTCGTGTGATCGGCGGTGGTGTTGCTGGTCTATTGACTGCTGCTAGCCCAATCCAAATTGTGATGGGAAGCTTCATGCCGTATAGTCAAAAGGCACAGAAAAGAAAGCAACATCGTGAGAACACAGTGGCATCTCCAGTTTCTGGTGCGATGGCGGCAAGACCTATCTCACAGGCGAATCCTGATGGTGTTGGTGAAAACTGTTTCACACCCATGGCCCAGCAGCATCTTCCAGAACAAAGCCACAGAGAATCAGACAACATTACAAGCAGCGATAAACAGAGTTTAGATGCCACACCCAATGGTTCTGATTGGAACGGCTTTGAAGAGTTGTCTGATCAGGGCCCAACCCCAGACATCAATATATCTCTGCCTGGGGAATAG 1095 0.5105 MEEKDVHVFGSPGNSGSGQPLQPVGVSVPQVTNMTVNMNLQNSGGPTVGDAATMTSPASTGGGRPGSFDLFGKKKRGRPRKYDSDGKPRVTTTSYQGAPSQQGFSLSPSSPSEFSSKRGRGRPPGSGNWQLLASLGELFANTAAGDFTPHVVTVHTGEDVAGKILSFAQKGTRGVCVLSANGAISNVTLRQPGSSGGLLTYEGRFEILSLSGSYTASDNGGIKSRTGGLSVSLAGPDGRVIGGGVAGLLTAASPIQIVMGSFMPYSQKAQKRKQHRENTVASPVSGAMAARPISQANPDGVGENCFTPMAQQHLPEQSHRESDNITSSDKQSLDATPNGSDWNGFEELSDQGPTPDINISLPGE 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g0726 364 Pfam AT hook motif 73 84 IPR017956 GO:0003677
Lele16g0726 364 Pfam AT hook motif 117 126 IPR017956 GO:0003677
Lele16g0726 364 Gene3D - 149 282 - -
Lele16g0726 364 MobiDBLite consensus disorder prediction 1 128 - -
Lele16g0726 364 MobiDBLite consensus disorder prediction 12 62 - -
Lele16g0726 364 MobiDBLite consensus disorder prediction 88 116 - -
Lele16g0726 364 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 45 322 IPR039605 GO:0003680
Lele16g0726 364 ProSiteProfiles PPC domain profile profile. 144 287 IPR005175 -
Lele16g0726 364 MobiDBLite consensus disorder prediction 69 87 - -
Lele16g0726 364 SUPERFAMILY AF0104/ALDC/Ptd012-like 145 270 - -
Lele16g0726 364 MobiDBLite consensus disorder prediction 328 347 - -
Lele16g0726 364 Pfam Plants and Prokaryotes Conserved (PCC) domain 149 262 IPR005175 -
Lele16g0726 364 MobiDBLite consensus disorder prediction 313 364 - -
Lele16g0726 364 CDD DUF296 148 262 IPR005175 -
Lele16g0726 364 SMART AT_hook_2 73 85 IPR017956 GO:0003677
Lele16g0726 364 SMART AT_hook_2 117 129 IPR017956 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g0726 Lele-ChrLele16 4093112 4095543 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g0726 73 306 AT-hook Motif Nuclear Localized (AHL) Family AT4G12080 50.000 1.65e-67 215