Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g0721 ATGGCTTCTTCTTCCCGCCGGAGGTCGCACACACAGCTCTGCTCTCTTCATAACATGAACAACACTTTTCCTCTGAACCTTGCATTGGTCTTGGCCTTCGCTTTACTTTGTGGTGTCACTCAATGTCTGGGTTTAGTCCAAAATGACACTCACGCTCTCACTCAGTTCCGCCTCCAAGCTGATGCTCATGGCTCTCTTCTTGTCAACTGGACCGGTGCCGACGCCTGCTCTGCTTTCTGGCGCGGCGTTCAGTGCTCCCCTAATGGCCAAGTCGTCGGCATCTCGCTTCCTTCTCTTAATCTCCGAGGCCCTGTTGATTCTCTGTCTTCGTTAAGCTACTTGCGCGTCCTTGACCTCCATGATAATCGATTGAACGGCAGCGTTGCGCCTCTCTCTAACTGTACTAGTCTTGAACTTCTTTATCTCTCTGGGAATGACTTCTCCGGCGAGATACCGCCGGAGATAGCTTCGCTCACGCGTCTGCTCAGGCTTGACCTCTCTGACAACAACATCCGAGGTCCTATTCCTAAGGAACTGTCCAAATTGACTGCGCTTCTCACGCTCAGGCTACAAAACAATGAGCTCACCGGGCATATCCCTGATCTCTCCGTTTCTCTGCTCAAACTCACGGAGCTCAACATGACCAACAACGAGTTCTATGGAAGCTTGCCCGATGGAATGTTGAAGAAATTTGGTGACGTTAGTTTCTCTGGGAATAAAGGTTTATGTGGATCAAGCCCATTGCCGGTTTGTTCCTCCACAACAGAGAATCTTCCTTCTTCTTCAGCATCGGCTCCAACAGTTTCTTCTAAGCCAACCTCGTTGCCCCAGACAAGCGCGAGTCCTCCTCCCAAAAGTCAACCCCGAAAGGGGTTAAGTACCGGAGTTATTGTAGCCATTGTGGTGGCGAATTGTGTGGCATTGCTGGTGATAACCTCTTTCATCGTTGCTCATTGCTGCGCCAGAGGACGAACCTCCGATTCTATGGTGGGTAGTGAGATTGGGAAGAGGAAAAGCGGGAGTAGCTATGGAAGTGAGAAAAAGGTGTACGCAAGTGGGTGTGTGGACAGTGACGGAACTACCGGAACGGACCGAAGCAGGCTTGTATTTTTTGATAGAAGGAGTCAATTCGAGCTGGAAGATCTGCTGCGAGCATCGGCGGAGATGCTGGGAAAGGGAAGCTTGGGAACAGTGTACAAGGCAGTGCTCGACGATGGATGCACCGTGGCGGTTAAGAGACTCAGAGACGCAAACCCATGCGCCTGGAAGGAGTTCGAGCAGTACATGGATGTGATCGGAAAGCTCAAGCACCTCAATATTGTGAGACTCAGAGCTTATTACTATGCCAGAGAAGAAAAGCTCCTCGTCTATGATTATCTCCCCAACGGAAGCTTGCATGCTCTTCTTCACGGCAACCGTGGTCCAGGAAGAATCCCACTGGATTGGACTACGAGAATAAGCTTGGTTTTGGGGGCAGCCAGAGGACTCGCTCGGATTCATGCTGAATATAGTGCAGCAAAAATACCTCACGGCAACATAAAATCTTCCAATGTTGTACTCGACAAGAATGGCGTTGCTTGCATCTCTGACTTTGGCTTGGCTCTGCTATTGAGCCCTGTTCATGCAATTGCAAGACTGGGCGGATACAGAGCTCCCGAACAAGAAGAAAGCAAGAAGCTGTCTCAGCAGGCAGACGTGTACAGCTTCGGTGTCTTGCTGTTGGAAGTTCTCACTGGTAAAACCCCAAAGCAGGAGCCTTCACCGACCCGTCCTAGGTTGGTTGAAGAGGAACAAACTGTGGATCTCCCAAAATGGGTGCGATCTGTAGTGAAAGAAGAATGGACAGCGGAAGTGTTTGATCAAGAATTGTTGAGGTACAAGAACATAGAAGAAGAGTTGGTGTCCATGTTGCATGTGGGGTTGTCGTGTGTGGTGGCAGAGCCAGAGAAGAGGCCAAACATGGCGGAAGTTGCTAAGATGATTGAAGAGATCAGGGTGGAGCAATCTCCTCTGGGCGAAGACTATGATGAGTCTCGCAATTCACTTTCACCTTCGCTTCCCACCACTGAAGATGGACTAGCTTAA 2085 0.5007 MASSSRRRSHTQLCSLHNMNNTFPLNLALVLAFALLCGVTQCLGLVQNDTHALTQFRLQADAHGSLLVNWTGADACSAFWRGVQCSPNGQVVGISLPSLNLRGPVDSLSSLSYLRVLDLHDNRLNGSVAPLSNCTSLELLYLSGNDFSGEIPPEIASLTRLLRLDLSDNNIRGPIPKELSKLTALLTLRLQNNELTGHIPDLSVSLLKLTELNMTNNEFYGSLPDGMLKKFGDVSFSGNKGLCGSSPLPVCSSTTENLPSSSASAPTVSSKPTSLPQTSASPPPKSQPRKGLSTGVIVAIVVANCVALLVITSFIVAHCCARGRTSDSMVGSEIGKRKSGSSYGSEKKVYASGCVDSDGTTGTDRSRLVFFDRRSQFELEDLLRASAEMLGKGSLGTVYKAVLDDGCTVAVKRLRDANPCAWKEFEQYMDVIGKLKHLNIVRLRAYYYAREEKLLVYDYLPNGSLHALLHGNRGPGRIPLDWTTRISLVLGAARGLARIHAEYSAAKIPHGNIKSSNVVLDKNGVACISDFGLALLLSPVHAIARLGGYRAPEQEESKKLSQQADVYSFGVLLLEVLTGKTPKQEPSPTRPRLVEEEQTVDLPKWVRSVVKEEWTAEVFDQELLRYKNIEEELVSMLHVGLSCVVAEPEKRPNMAEVAKMIEEIRVEQSPLGEDYDESRNSLSPSLPTTEDGLA 694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g0721 694 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 33 666 - -
Lele16g0721 694 CDD STKc_IRAK 390 664 - -
Lele16g0721 694 MobiDBLite consensus disorder prediction 668 694 - -
Lele16g0721 694 Pfam Protein kinase domain 388 659 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele16g0721 694 Gene3D Ribonuclease Inhibitor 43 104 IPR032675 -
Lele16g0721 694 Gene3D Phosphorylase Kinase; domain 1 357 459 - -
Lele16g0721 694 FunFam pollen receptor-like kinase 1 355 459 - -
Lele16g0721 694 ProSiteProfiles Protein kinase domain profile. 384 666 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele16g0721 694 MobiDBLite consensus disorder prediction 254 276 - -
Lele16g0721 694 Gene3D Transferase(Phosphotransferase) domain 1 460 681 - -
Lele16g0721 694 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 460 673 - -
Lele16g0721 694 Gene3D Ribonuclease Inhibitor 105 255 IPR032675 -
Lele16g0721 694 SUPERFAMILY Protein kinase-like (PK-like) 388 662 IPR011009 -
Lele16g0721 694 MobiDBLite consensus disorder prediction 254 290 - -
Lele16g0721 694 SUPERFAMILY L domain-like 48 244 - -
Lele16g0721 694 FunFam Nuclear pore complex protein NUP107 46 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g0721 Lele-ChrLele16 4063897 4066055 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g0721 45 690 Receptor kinase-like Gene Family AT2G36570 67.117 0.0 884
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lele16g0721 Pkinase 7e-33 CL0016