Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g0717 ATGGGAGCCTCGCTATCCACCCTGGGAACGAGCGGTGCGACCATCGGTCCGGGTCTTGGGGATATTCCCGAGAGCTGCGTGGCCCGCGTTTTTCTGTATTTGACTCCGCCTGAGATATGTAATTTGGCGCGCCTGAATCGAGCTTTCCGTGGTGCGGCGTCTGCTGATTCCGTGTGGGGAGCAAAGTTGCCCCCTAATTATCAAGATCTGCTGTATTTAATGCCTCCCGAAACGTACCGGAATTTATCCAAGAAGGACATATTTGCGCTACTGTCTCGACCAGTCCCATTCGATGATGGCAATAAGGTGGGTGCTCTTCCGGAAGTTTGGCTGGACACGATCACGGGGAAGGTTTGCATGTCCATATCGGCGAAAGCAATGGCGATTACTGGAATTGATGATCGCAGATACTGGAATTGGATTCCCACCGAAGAATCTAGGTTCCACATCGTGGCTTATTTACTACAAATATGGTGGTTTGAAGTGGATGGGGATGTGAAGTTTCCATTTCCTGCTGATGTTTACACTGTCTGCTTCAGGCTCCACCTTGGAAGGTTTTACAGAAGGCTTGGAAGGCGAGTATGCAATTACGAGCACAGCCATGGTTGGGATATAAAACCAGTGAAATTTGAGCTGTCAACTTCAGATGGTCAGCAAGCATTGTGTGAGCACTGTTTGGATGAAACAGAATGCGATGGTGCATATGGGAATCATAAGCGGGGATGCTGGGTGAATTACAAGGTGGGCGAATTTGTTGTCAGCGGAGCTGAACCAACCACTGAAGTGAGGTTCTCCATGAAGCAGATCGATTGTACGCATTCCAAAGGTGGGCTTTGTGTAGATTCGGTATTTATTATTCCCAGTCATTTGAAGGAGCGCAAGAGAGAAGAAGGCATTTTTTTTTTGGGGTACAAGACGAGGGCTAAAAAGCCCTAA 936 0.484 MGASLSTLGTSGATIGPGLGDIPESCVARVFLYLTPPEICNLARLNRAFRGAASADSVWGAKLPPNYQDLLYLMPPETYRNLSKKDIFALLSRPVPFDDGNKVGALPEVWLDTITGKVCMSISAKAMAITGIDDRRYWNWIPTEESRFHIVAYLLQIWWFEVDGDVKFPFPADVYTVCFRLHLGRFYRRLGRRVCNYEHSHGWDIKPVKFELSTSDGQQALCEHCLDETECDGAYGNHKRGCWVNYKVGEFVVSGAEPTTEVRFSMKQIDCTHSKGGLCVDSVFIIPSHLKERKREEGIFFLGYKTRAKKP 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g0717 311 PANTHER F-BOX PROTEIN PP2-A15 8 295 - -
Lele16g0717 311 ProSiteProfiles F-box domain profile. 16 62 IPR001810 GO:0005515
Lele16g0717 311 Pfam Phloem protein 2 117 287 IPR025886 -
Lele16g0717 311 SUPERFAMILY F-box domain 17 82 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g0717 Lele-ChrLele16 4043677 4046406 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele16g0717 16 4043677 4046406 Lele05g1136 05 7091145 7094812 CCT
Lele16g0717 16 4043677 4046406 Lele06g0999 06 6196303 6200740 CCT
Lele16g0717 16 4043677 4046406 Lele07g1179 07 7117232 7121712 CCT
Lele16g0717 16 4043677 4046406 Lele08g0986 08 6256681 6261159 CCT
Lele13g1702 13 25604335 25607278 Lele16g0717 16 4043677 4046406 hybridization
Lele14g1644 14 24003211 24006751 Lele16g0717 16 4043677 4046406 hybridization