Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g0709 ATGTCAATTCTCCAAAGGCACCCCACCTGGCCAGGGACGAGACGCAGGAACCTTTACCGCAGAAGCTCATTTAGGCCACACTGCCGTTGTTCATATTCTTCCTCTGATCAATCTTCTCCTGAACCATCCACTCCATCTCTGCAGATTGAGGGAAGAAGGGCATTGCTCACTGCTCTTCTGACGACTGCTGCTGGAGTTTATGTGTGCGATGTGGCTGGAGCAGCTAGCACAAGTAGAAGAGCCCTTCGTGCATCGAAAATTCCGGAAAGTGAATTCAAAACCCTGCCTAATGGTCTTAAGTCAGTACATAACTATTACCTCCCCAATAATCTCGATCTTCCTGGCTTCTGCATTAGCTTCTTACGTCTCACGATGTATTATGATTTGAAGGTGGGGGGTGGAGCTCAGGCTGTGAAGGGATCCCGTGTTGCTGTTCACTATGTTGCTAAGTGGAAGAATATTACCTTTATGACCAGCAGACAAGGAATGGGTGTTGGAGGAGGAACGCCATATGGATTTGATGTAGGCCAATCTGAGAATGGAAATGTCCTTAAAGGGTTAGATTTAGGGGTGCAAGGCATGCGAGTAGGAGGCCAGAGGTTGTTAATTGTTCCTCCTGAACTAGCCTATGGAAGCAAAGGAGTCCAGGAGATCCCTCCAAATGCAACAATAGAGTTAGATGTTGAGCTGCTTTCCATCAAACAAAGCCCATTTGGGACTGCGGTAAAGATAGTTGAAGGCTAA 744 0.4718 MSILQRHPTWPGTRRRNLYRRSSFRPHCRCSYSSSDQSSPEPSTPSLQIEGRRALLTALLTTAAGVYVCDVAGAASTSRRALRASKIPESEFKTLPNGLKSVHNYYLPNNLDLPGFCISFLRLTMYYDLKVGGGAQAVKGSRVAVHYVAKWKNITFMTSRQGMGVGGGTPYGFDVGQSENGNVLKGLDLGVQGMRVGGQRLLIVPPELAYGSKGVQEIPPNATIELDVELLSIKQSPFGTAVKIVEG 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g0709 247 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 136 231 IPR001179 GO:0003755
Lele16g0709 247 SUPERFAMILY FKBP-like 125 234 - -
Lele16g0709 247 Gene3D - 123 241 IPR046357 GO:0003755
Lele16g0709 247 PANTHER FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA 125 242 - -
Lele16g0709 247 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 140 234 IPR001179 GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g0709 Lele-ChrLele16 3998333 4001830 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g0709 129 233 Calmodulin-binding Proteins AT5G48570 31.818 1.55e-06 47.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g1709 13 25640414 25643713 Lele16g0709 16 3998333 4001830 hybridization
Lele14g1653 14 24043398 24046633 Lele16g0709 16 3998333 4001830 hybridization