Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g0702 ATGCGTAGTAGACAAGTAGCCGACCCGATAAGAAGATCTTCGTATCACGATGTAGTGAGAGCTGCAGAAATCCATAAGGTGCTGGATATAAGTGGAGTACAGACGTATGTGATAAACAGTGCACGAGTGATGTTTCTGAACGAGAGGCCTCAGCCAAAATCATCGTCATCTGGGAAAGGAGGAGGAGCTCACATTTGCCAGGTTTGTGGAAGAAGCCTCTTGGACCCATTTCGTTTTTGTTCTTTGGGATGTAAGCTTGTGGGAATAAAGAGAAACGGGAATGCGAGCTTTGGTTTGGACGGGGCACGAGAAGAAGAATTGCGTGAAGGGTCACAACAAGATATGTATCCGGCCACGCCTCCTCCTCCACCTGCTTCATCTGCAAGAAGAAGAAAAGGCATTCCTCGTAGAGCTCCTTTTGCCTCCTAA 429 0.4755 MRSRQVADPIRRSSYHDVVRAAEIHKVLDISGVQTYVINSARVMFLNERPQPKSSSSGKGGGAHICQVCGRSLLDPFRFCSLGCKLVGIKRNGNASFGLDGAREEELREGSQQDMYPATPPPPPASSARRRKGIPRRAPFAS 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g0702 142 Pfam PLATZ transcription factor 11 86 IPR006734 -
Lele16g0702 142 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 10 140 - -
Lele16g0702 142 MobiDBLite consensus disorder prediction 92 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g0702 Lele-ChrLele16 3955040 3956570 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Lele16g0702 PLATZ 3.7e-30 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g1717 13 25692508 25694086 Lele16g0702 16 3955040 3956570 hybridization
Lele14g1662 14 24086955 24087976 Lele16g0702 16 3955040 3956570 hybridization