Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g0697 ATGACCGTCAAGGAGCTCTTCGATACTGGTCTACTGGATGGGGTTCCTGTAGTTTACATGGGCGGAAAGAAGGCTTCGGGACTGCGAGGCATTATTAAAGATGGAGGAATATTGTGTTCTTGCTGTCTGTGCAATGGACGCAGGGTTATTCCACCTTCCCAATTTGAGATTCATGCATGCAAAGCGTATAAGCGAGCAGCACAATACATTTGCCTGGAAAATGGGAAGAGCCTGCTTGAGCTATTGAGAGCGTGCAGAGGAGCTCCCTTACATACTCTGGAGGCGACAATTCAAAACGTTGTTTGTTCTCCGCCTGATGAAAAGTATTTCACTTGTAAAATGTGCAAGGTATGTTTCCCTCCTTCCTGTGTGGAAAGAGTAGGGTCTATATGCAGTTCTTGCAAGGAGTCCAAGGAATCTCAGGACAGTTCTATCGATAAAGTGGGCAAAAGAGTCAGGTCCCCTAGACCGCTCTCTGTCTCTAACCAGTCTGATACTTCTGAGAAGCGTATCTCTTCGCAGATTAAGAGACACTGGAAGAAAAGAACAAAGTCGCCAAAATGGGTTAGCCGTGCAAAGTCTTCCAAGAATTCTTCAATGCCTATCCTATCACGAAAGAAGAGTCTTTGGAGGATGAAAAAGAAGTCCTCAAAGTTGTCAGTAAAATTGAAGACTGCAAGAACTACTTCAAATTCAGTGCGTTTATCTTCGCCAAACAAGAGTCACTGGAGGGTCACCAAAAAGCACCAGCAGTTGCATAAGTTAGTCTTTGAGGAAGGCGGATTGCCTGATGGAGCCGAAGTAGCTTATTATGCACGTGGACAGAAACTGCTCGAGGGTTACAAAAAGGGCTTTGGAATAATGTGTCGATGCTGCAACTCTGAGGTCAGCCCCTCACAGTTTGAGGTCCATGCAGGCTGGGCTTCCCGCAAGAAACCTTATGCATACATCTACACATCAAATGGGGTGTCTCTCCATGAGTTAGCCATATCTCTCTCAAAAGATCGCAAATACTCTGCAAAGGATAATGATGATTTATGCATTATTTGTTGGGATGGCGGAGATCTGTTGCTTTGTGATGGATGCCCAAGGGCTTTTCATAAAGAATGTGCATCTCTGTCAAGTATTCCGCGTGGTAATTGGTACTGTAAGGTTTGCCAAAACATGTTCCTAAGAGAAAGGTTTGTGGCACACAATGCCAATGCTGTGGCAGCTGGAAGGGTTGAAGGAGTTGATCCTATTGAGCAGATAACCAAGAGATGTGTGCGCATTGTTGAAGATGTTGATGCTGAGCTCAATGGATGTGCTTTATGCAGGGCTTGTGACTTCAGCAAATCAGGATTTGGTCCACGAACAATAATAATTTGTGATCAGTGCGATAAAGAATTTCATGTTGGCTGCTTGAAGGATCATAAAATGTCATTTTTGAAGGAATTGCCAGAAGGGGATTGGTTTTGTTGCCATGATTGCTCAACCATACATTCTACTTTTCAGAACCTCCTGGTTAAGGGGGCTGAAAAACTTCCAGAACCTCTCTTGGATGTTATAAAGAAGAAGCAAGAGGAAAAAGGTTTAGAATCCCTTAGTGATATTGATGTGAAATGGAGGCTTCTTAAGGGAAAAATTGCTTCTCCTGAAACTAGGGCATTTCTTTTGCAGGCTGTCTCAATCTTTCATGAATGCTTCGATCCTATAGTTGATTCAATTACTGGACGCAATCTTATCACGGCCATGATATATGGAAGGACTGTTCGGAGACAAGAGTTTGGGGCAATGCATTGCGCAATATTAACGGTCAATTCTACTGTGGTATCCGCTGCCTTGCTTCGAATTTTTGGCAGTGATTTGGCAGAACTCCCTCTAGTTGCAACTCGTAGTGTTAACCATGGAAAGGGGTACTTCCAAATACTATACTCGTGCATTGAGAAATTGCTGGCTTCTTTGAACGTGAAGAACCTTGTGTTGCCAGCTACCGCCACTGCAGAGTCCATTTGGATTGAGAAGTTTGGGTTCGTAAAGATGACGCCAGACGAGAAAGAGCTACCAGCAGATGGTGATATTTCAAGGAACATCCATGCTTCATAA 2085 0.4388 MTVKELFDTGLLDGVPVVYMGGKKASGLRGIIKDGGILCSCCLCNGRRVIPPSQFEIHACKAYKRAAQYICLENGKSLLELLRACRGAPLHTLEATIQNVVCSPPDEKYFTCKMCKVCFPPSCVERVGSICSSCKESKESQDSSIDKVGKRVRSPRPLSVSNQSDTSEKRISSQIKRHWKKRTKSPKWVSRAKSSKNSSMPILSRKKSLWRMKKKSSKLSVKLKTARTTSNSVRLSSPNKSHWRVTKKHQQLHKLVFEEGGLPDGAEVAYYARGQKLLEGYKKGFGIMCRCCNSEVSPSQFEVHAGWASRKKPYAYIYTSNGVSLHELAISLSKDRKYSAKDNDDLCIICWDGGDLLLCDGCPRAFHKECASLSSIPRGNWYCKVCQNMFLRERFVAHNANAVAAGRVEGVDPIEQITKRCVRIVEDVDAELNGCALCRACDFSKSGFGPRTIIICDQCDKEFHVGCLKDHKMSFLKELPEGDWFCCHDCSTIHSTFQNLLVKGAEKLPEPLLDVIKKKQEEKGLESLSDIDVKWRLLKGKIASPETRAFLLQAVSIFHECFDPIVDSITGRNLITAMIYGRTVRRQEFGAMHCAILTVNSTVVSAALLRIFGSDLAELPLVATRSVNHGKGYFQILYSCIEKLLASLNVKNLVLPATATAESIWIEKFGFVKMTPDEKELPADGDISRNIHAS 694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g0697 694 PANTHER AUTOIMMUNE REGULATOR 1 679 - -
Lele16g0697 694 SUPERFAMILY FYVE/PHD zinc finger 428 490 IPR011011 -
Lele16g0697 694 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 590 678 IPR016181 -
Lele16g0697 694 FunFam Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain 333 410 - -
Lele16g0697 694 Gene3D - 535 682 - -
Lele16g0697 694 ProSiteProfiles Zinc finger PHD-type profile. 344 389 IPR019787 -
Lele16g0697 694 ProSitePatterns Zinc finger PHD-type signature. 347 386 IPR019786 -
Lele16g0697 694 SUPERFAMILY FYVE/PHD zinc finger 333 388 IPR011011 -
Lele16g0697 694 MobiDBLite consensus disorder prediction 174 189 - -
Lele16g0697 694 SMART PHD_3 437 491 IPR001965 -
Lele16g0697 694 SMART PHD_3 346 387 IPR001965 -
Lele16g0697 694 MobiDBLite consensus disorder prediction 144 203 - -
Lele16g0697 694 Pfam Tify domain binding domain 280 330 IPR032308 -
Lele16g0697 694 Pfam Tify domain binding domain 30 85 IPR032308 -
Lele16g0697 694 Pfam PHD-finger 347 388 IPR019787 -
Lele16g0697 694 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 433 493 IPR013083 -
Lele16g0697 694 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 332 421 IPR013083 -
Lele16g0697 694 ProSiteProfiles Zinc finger PHD-type profile. 435 493 IPR019787 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g0697 Lele-ChrLele16 3920517 3926929 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g0697 2 678 PHD Transcription Factor Family AT2G36720 53.535 0.0 751
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Lele16g0697 TDBD 3.7e-13 No_clan