Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g0695 ATGGGATTTAACAGAATCATCTTCTGGCTACTTGCCTTTTTCACCTTTTCTCTTTCCATCATCATTGTCTGTCATTACACGCCAGCTTCCCTCACCACCATCTCTTCCATCATTCCTCAAAGTAATTTCAAGCAATCTGTGATCTTTAGTAGGATTATAAAGCTCACTGGCGCTGAAGACTTTGTCTCTCTAATAACCAGAGTTGCGAGGAGGCTTCACCGCGGAAGGAACCACAAGGAAAAATGTGACGAGACCACTTGGGATTCTGATCTTATTTCGGACTACAATGTGAGTCTTGTTTTAACCGTTAGCGTAAAGGGTTGTGGAAATTTTAGCAGCATACAAAAAGCAGTGAACGCTGTTCCTGAATCGAGGTCTGATAAAACTCTCATCATTGTTGATTCTGGCGTATACAGAGAGAAGGTAGCGGTGGAAGCAAGCAAAACAAACTTGATATTGCAAGGTCGAGGATATCTGAACACAATCATAGAATGGAATGATACTGCAAATTCTACAGGAGGGACCTTTAATAGTTACTCAGTTGGAGTCTTTGCTTCTAAGTTTCTTGCTTACAACATTAGTTTTAAAAACACGGCTCCAGCACCATCACCGGGTATGATAGGAGCACAAGCAGTGGCGCTAAGAGTGAGCGGCGACGAGGCAGCATTCTATGGATGCGGAATGTATGGTGCTCAGGACACCCTCAATGATGATAATGGAAGACATTACTTCAAAGAATGTTTCATCCAAGGATCTATTGATTTCATATTTGGAAATGCTAGATCTCTTTATGAGGATTGTAGCATAAACTCTATAGCAACAGACGAAGGGGCTATGATTACTGGGTCCATCACAGCTCAAGCGAGACAATCAAAGGATGACGAAAGTGGGTTTTCATTTGTGAATTGTAAGATTGATGGAAGGGGAAAAGTATGGCTTGGAAGAGCATGGGGAGCATATGCCACTGTGGTCTTCTCCACAACATATATGTCTGATGTTGTAGCTCCTGAAGGATGGAATGATTGGTCTAATTCCACAAGAGACGTGACTGTCTTTTTTGGGGAATACTATTGTCTTGGAAGTGGAGCCAACTACTCGTCTAGAGTCTCATATGGAAGGCAACTTAGAGACTATGAAGCAGCCCGTTTCATGAATATTTCATATATTGATGGAAATGGCTGGCTTCTTAATTATAAAAAATAG 1203 0.4165 MGFNRIIFWLLAFFTFSLSIIIVCHYTPASLTTISSIIPQSNFKQSVIFSRIIKLTGAEDFVSLITRVARRLHRGRNHKEKCDETTWDSDLISDYNVSLVLTVSVKGCGNFSSIQKAVNAVPESRSDKTLIIVDSGVYREKVAVEASKTNLILQGRGYLNTIIEWNDTANSTGGTFNSYSVGVFASKFLAYNISFKNTAPAPSPGMIGAQAVALRVSGDEAAFYGCGMYGAQDTLNDDNGRHYFKECFIQGSIDFIFGNARSLYEDCSINSIATDEGAMITGSITAQARQSKDDESGFSFVNCKIDGRGKVWLGRAWGAYATVVFSTTYMSDVVAPEGWNDWSNSTRDVTVFFGEYYCLGSGANYSSRVSYGRQLRDYEAARFMNISYIDGNGWLLNYKK 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g0695 400 FunFam Pectinesterase 95 400 - -
Lele16g0695 400 ProSitePatterns Pectinesterase signature 2. 249 258 IPR033131 -
Lele16g0695 400 Gene3D - 95 399 IPR012334 -
Lele16g0695 400 Pfam Pectinesterase 102 392 IPR000070 GO:0030599|GO:0042545
Lele16g0695 400 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 91 395 - -
Lele16g0695 400 SUPERFAMILY Pectin lyase-like 98 395 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g0695 Lele-ChrLele16 3914346 3916151 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g0695 94 395 Carbohydrate Esterase AT1G05310 53.770 8.48e-118 346